RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 RAB1BQ9H0U4 201 aa13.03□□□□□ -0.32
SEC13-215ENST00000477547 ABCB9Q9NP78 766 aa13.03□□□□□ -0.32
SEC13-215ENST00000477547 A0A1B0GWJ7 208 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 A6NIN4 97 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 ANXA2P2A6NMY6 339 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 ZNF850A8MQ14 1090 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 F5H5P2 479 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 H0YL77 283 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 TPD52L2O43399 206 aaKnown RBP13.02□□□□□ -0.33
SEC13-215ENST00000477547 NCR1O76036 304 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 INMTO95050 263 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 CST4P01036 141 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 CD2P06729 351 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 ADH4P08319 380 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 OCM2P0CE71 109 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 MAGEB1P43366 347 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 PTH2RP49190 550 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 RPS25P62851 125 aaKnown RBP13.02□□□□□ -0.33
SEC13-215ENST00000477547 TNFAIP6P98066 277 aaPredicted RBP13.02□□□□□ -0.33
SEC13-215ENST00000477547 TPBGQ13641 420 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 FAM209AQ5JX71 171 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 PHC2Q8IXK0 858 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 MUL1Q969V5 352 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 C10orf35Q96D05 121 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 ADAT3Q96EY9 351 aaPredicted RBP13.02□□□□□ -0.33
SEC13-215ENST00000477547 TRMT61AQ96FX7 289 aaKnown RBP13.02□□□□□ -0.33
SEC13-215ENST00000477547 PERPQ96FX8 193 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 CHST5Q9GZS9 411 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 PPP1R3EQ9H7J1 279 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 SAP30LQ9HAJ7 183 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 ZNF275Q9NSD4 429 aaPredicted RBP13.02□□□□□ -0.33
SEC13-215ENST00000477547 BEX4Q9NWD9 120 aaPredicted RBP13.02□□□□□ -0.33
SEC13-215ENST00000477547 MPC1Q9Y5U8 109 aa13.02□□□□□ -0.33
SEC13-215ENST00000477547 TRBV5-5A0A0J9YX44 114 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 MAGEA13PA6NCF6 341 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 ANKRD61A6NGH8 418 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 TRIM64CA6NLI5 447 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 GMDSO60547 372 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 NDUFS7O75251 213 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 GATBO75879 557 aaKnown RBP13.01□□□□□ -0.33
SEC13-215ENST00000477547 CD55P08174 381 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 RPS11P62280 158 aaKnown RBP eCLIP13.01□□□□□ -0.33
SEC13-215ENST00000477547 CCL8P80075 99 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 GPR50Q13585 617 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 SSX1Q16384 188 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 DEFB113Q30KQ7 82 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 Q499Y3 187 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 CEP78Q5JTW2 689 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 CLVS2Q5SYC1 327 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 TMEM42Q69YG0 159 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 TGIF2LYQ8IUE0 185 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 HPSE2Q8WWQ2 592 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 PP6455Q8WZ26 134 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 FGGYQ96C11 551 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 OR2V2Q96R30 315 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 OR14A2Q96R54 314 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 RTL8AQ9BWD3 113 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 MRPS26Q9BYN8 205 aaKnown RBP13.01□□□□□ -0.33
SEC13-215ENST00000477547 GSX2Q9BZM3 304 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 GPR173Q9NS66 373 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 ZNF701Q9NV72 531 aaPredicted RBP13.01□□□□□ -0.33
SEC13-215ENST00000477547 NDUFB11Q9NX14 153 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 NKIRAS2Q9NYR9 191 aa13.01□□□□□ -0.33
SEC13-215ENST00000477547 CCRL2O00421 344 aa13□□□□□ -0.33
SEC13-215ENST00000477547 NRASP01111 189 aa13□□□□□ -0.33
SEC13-215ENST00000477547 GABRA5P31644 462 aa13□□□□□ -0.33
SEC13-215ENST00000477547 GP2P55259 537 aaKnown RBP13□□□□□ -0.33
SEC13-215ENST00000477547 ATP5J2P56134 94 aa13□□□□□ -0.33
SEC13-215ENST00000477547 MOB3CQ70IA8 216 aa13□□□□□ -0.33
SEC13-215ENST00000477547 MS4A15Q8N5U1 240 aa13□□□□□ -0.33
SEC13-215ENST00000477547 NPRL2Q8WTW4 380 aa13□□□□□ -0.33
SEC13-215ENST00000477547 ITLN1Q8WWA0 313 aa13□□□□□ -0.33
SEC13-215ENST00000477547 NEU4Q8WWR8 484 aaPredicted RBP13□□□□□ -0.33
SEC13-215ENST00000477547 THRSPQ92748 146 aa13□□□□□ -0.33
SEC13-215ENST00000477547 TMEM106AQ96A25 262 aa13□□□□□ -0.33
SEC13-215ENST00000477547 MBD6Q96DN6 1003 aa13□□□□□ -0.33
SEC13-215ENST00000477547 ITPKCQ96DU7 683 aa13□□□□□ -0.33
SEC13-215ENST00000477547 MEGF10Q96KG7 1140 aa13□□□□□ -0.33
SEC13-215ENST00000477547 MICU1Q9BPX6 476 aa13□□□□□ -0.33
SEC13-215ENST00000477547 EGLN1Q9GZT9 426 aa13□□□□□ -0.33
SEC13-215ENST00000477547 DECR2Q9NUI1 292 aa13□□□□□ -0.33
SEC13-215ENST00000477547 IGHV3-64DA0A0J9YX35 117 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 ZNF879B4DU55 563 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 RGS9O75916 674 aaPredicted RBP12.99□□□□□ -0.33
SEC13-215ENST00000477547 LY6HO94772 140 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 IGHV4-39P01824 125 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 HPXP02790 462 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 PSMA1P25786 263 aaKnown RBP12.99□□□□□ -0.33
SEC13-215ENST00000477547 MAPK3P27361 379 aaPredicted RBP12.99□□□□□ -0.33
SEC13-215ENST00000477547 CD200P41217 278 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 SRP9P49458 86 aaKnown RBP12.99□□□□□ -0.33
SEC13-215ENST00000477547 EFNA4P52798 201 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 MZT1Q08AG7 82 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 CNN3Q15417 329 aaKnown RBP12.99□□□□□ -0.33
SEC13-215ENST00000477547 TRAM1Q15629 374 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 DMRTC1Q5HYR2 192 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 SYT6Q5T7P8 510 aaPredicted RBP12.99□□□□□ -0.33
SEC13-215ENST00000477547 KRT74Q7RTS7 529 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 PARP16Q8N5Y8 322 aa12.99□□□□□ -0.33
SEC13-215ENST00000477547 SPERTQ8NA61 448 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms