RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 RTL8AQ9BWD3 113 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 CXXC4Q9H2H0 198 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 DECR2Q9NUI1 292 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 BEX4Q9NWD9 120 aaPredicted RBP12.93□□□□□ -0.34
SNIP1-202ENST00000468040 C14orf119Q9NWQ9 140 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 CKLFQ9UBR5 152 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 IL19Q9UHD0 177 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 SF3B6Q9Y3B4 125 aaKnown RBP12.93□□□□□ -0.34
SNIP1-202ENST00000468040 BAHCC1Q9P281 2608 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 ARFGEF3Q5TH69 2177 aa12.93□□□□□ -0.34
SNIP1-202ENST00000468040 H0YL77 283 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 TPD52L2O43399 206 aaKnown RBP12.92□□□□□ -0.34
SNIP1-202ENST00000468040 RGS9O75916 674 aaPredicted RBP12.92□□□□□ -0.34
SNIP1-202ENST00000468040 TNFRSF1AP19438 455 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 FBN2P35556 2912 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 CD200P41217 278 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 MAGEB1P43366 347 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 RPS25P62851 125 aaKnown RBP12.92□□□□□ -0.34
SNIP1-202ENST00000468040 CCL8P80075 99 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 CNN3Q15417 329 aaKnown RBP12.92□□□□□ -0.34
SNIP1-202ENST00000468040 CEACAM21Q3KPI0 293 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 ACSM3Q53FZ2 586 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 MOB3CQ70IA8 216 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 CDH24Q86UP0 819 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 OR5P3Q8WZ94 311 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 PHYHIPQ92561 330 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 MBD6Q96DN6 1003 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 ITPKCQ96DU7 683 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 SORCS2Q96PQ0 1159 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 DERL3Q96Q80 235 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 GSX2Q9BZM3 304 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 ZCCHC4Q9H5U6 513 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 SAP30LQ9HAJ7 183 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 BARX1Q9HBU1 254 aaPredicted RBP12.92□□□□□ -0.34
SNIP1-202ENST00000468040 NEK6Q9HC98 313 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 SCOCQ9UIL1 159 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 CELSR2Q9HCU4 2923 aa12.92□□□□□ -0.34
SNIP1-202ENST00000468040 TRBV5-7A0A0A0MS05 114 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 OR5B21A6NL26 309 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 TMEM210A6NLX4 147 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 F5H5P2 479 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 SC5DO75845 299 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 OCMP0CE72 109 aaPredicted RBP12.91□□□□□ -0.34
SNIP1-202ENST00000468040 GALP22466 123 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 EFNA4P52798 201 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 PPP3R1P63098 170 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 GNG3P63215 75 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 DEFB113Q30KQ7 82 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 CEP78Q5JTW2 689 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 CEACAM19Q7Z692 300 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 OR5A2Q8NGI9 324 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 HPSE2Q8WWQ2 592 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 DVL3Q92997 716 aaPredicted RBP12.91□□□□□ -0.34
SNIP1-202ENST00000468040 SPSB1Q96BD6 273 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 MEGF10Q96KG7 1140 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 OR2V2Q96R30 315 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 PPP1R3EQ9H7J1 279 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 GPR173Q9NS66 373 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 SLC7A11Q9UPY5 501 aa12.91□□□□□ -0.34
SNIP1-202ENST00000468040 SULT1B1O43704 296 aa12.9□□□□□ -0.34
SNIP1-202ENST00000468040 ALX3O95076 343 aa12.9□□□□□ -0.34
SNIP1-202ENST00000468040 F12P00748 615 aaPredicted RBP12.9□□□□□ -0.34
SNIP1-202ENST00000468040 CD36P16671 472 aa12.9□□□□□ -0.34
SNIP1-202ENST00000468040 ATF1P18846 271 aa12.9□□□□□ -0.34
SNIP1-202ENST00000468040 FSTP19883 344 aa12.9□□□□□ -0.34
SNIP1-202ENST00000468040 PRKACBP22694 351 aa12.9□□□□□ -0.34
SNIP1-202ENST00000468040 PTH2RP49190 550 aa12.9□□□□□ -0.34
SNIP1-202ENST00000468040 ATP5J2P56134 94 aa12.9□□□□□ -0.34
SNIP1-202ENST00000468040 MRPS11P82912 194 aaKnown RBP12.9□□□□□ -0.34
SNIP1-202ENST00000468040 FABP5Q01469 135 aa12.9□□□□□ -0.34
SNIP1-202ENST00000468040 UBE2V2Q15819 145 aa12.9□□□□□ -0.34
SNIP1-202ENST00000468040 CD200R1LQ6Q8B3 271 aa12.9□□□□□ -0.34
SNIP1-202ENST00000468040 UNQ9370/PRO34162Q6UXP9 181 aa12.9□□□□□ -0.34
SNIP1-202ENST00000468040 ITLN1Q8WWA0 313 aa12.9□□□□□ -0.34
SNIP1-202ENST00000468040 RNF170Q96K19 258 aa12.9□□□□□ -0.34
SNIP1-202ENST00000468040 CACNA1DQ01668 2161 aa12.9□□□□□ -0.34
SNIP1-202ENST00000468040 UNC79Q9P2D8 2635 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 TRDV1A0A1B0GX56 115 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 GABRPO00591 440 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 GPX5O75715 221 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 ARL6IP5O75915 188 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 NCR1O76036 304 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 PTBP3O95758 552 aaKnown RBP12.89□□□□□ -0.35
SNIP1-202ENST00000468040 RAB3AP20336 220 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 THBS2P35442 1172 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 TGFBR2P37173 567 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 GATA4P43694 442 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 MAB21L1Q13394 359 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 TIMM50Q3ZCQ8 353 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 ZNF529Q6P280 563 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 TMEM91Q6ZNR0 172 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 LRRC75A-AS1Q8N1F1 130 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 DNAAF1Q8NEP3 725 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 OR13C9Q8NGT0 318 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 ERGIC1Q969X5 290 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 CPNE2Q96FN4 548 aaPredicted RBP12.89□□□□□ -0.35
SNIP1-202ENST00000468040 PERPQ96FX8 193 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 MYOZ1Q9NP98 299 aaPredicted RBP12.89□□□□□ -0.35
SNIP1-202ENST00000468040 NOX4Q9NPH5 578 aa12.89□□□□□ -0.35
SNIP1-202ENST00000468040 TAS2R4Q9NYW5 299 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms