RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 GTF3AQ92664 365 aaKnown RBP12.91□□□□□ -0.34
NPHP4-205ENST00000466897 NRGNQ92686 78 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 TMEM106AQ96A25 262 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 ITPKCQ96DU7 683 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 ADAT3Q96EY9 351 aaPredicted RBP12.91□□□□□ -0.34
NPHP4-205ENST00000466897 ELMOD3Q96FG2 381 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 TRMT61AQ96FX7 289 aaKnown RBP12.91□□□□□ -0.34
NPHP4-205ENST00000466897 GSX2Q9BZM3 304 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 IL19Q9UHD0 177 aa12.91□□□□□ -0.34
NPHP4-205ENST00000466897 TRBV5-7A0A0A0MS05 114 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 ZNF879B4DU55 563 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 SPRY3O43610 288 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 LMX1BO60663 402 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 GPX5O75715 221 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 HLA-DPB1P04440 258 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 FSTP19883 344 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 GATA4P43694 442 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 FAM76BQ5HYJ3 339 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 LRRC75A-AS1Q8N1F1 130 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 OR5A2Q8NGI9 324 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 OR5D14Q8NGL3 314 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 OR13C5Q8NGS8 318 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 OR5P3Q8WZ94 311 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 PIGCQ92535 297 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 FGGYQ96C11 551 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 SORCS2Q96PQ0 1159 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 DERL3Q96Q80 235 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 TMED9Q9BVK6 235 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 EGLN1Q9GZT9 426 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 CXXC4Q9H2H0 198 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 C14orf119Q9NWQ9 140 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 PLEKHA6Q9Y2H5 1048 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 DYSFO75923 2080 aa12.9□□□□□ -0.34
NPHP4-205ENST00000466897 MAST4O15021 2626 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 OR5B21A6NL26 309 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 TMEM210A6NLX4 147 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 ZNF850A8MQ14 1090 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 H3BSH0 61 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 F12P00748 615 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-205ENST00000466897 TNFRSF1AP19438 455 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 CDKN1AP38936 164 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 SRP9P49458 86 aaKnown RBP12.89□□□□□ -0.35
NPHP4-205ENST00000466897 EFNA4P52798 201 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 RPS25P62851 125 aaKnown RBP12.89□□□□□ -0.35
NPHP4-205ENST00000466897 TNFAIP6P98066 277 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-205ENST00000466897 CNN3Q15417 329 aaKnown RBP12.89□□□□□ -0.35
NPHP4-205ENST00000466897 ACSM3Q53FZ2 586 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 ZCCHC24Q8N2G6 241 aaKnown RBP12.89□□□□□ -0.35
NPHP4-205ENST00000466897 DNAAF1Q8NEP3 725 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 OR10AD1Q8NGE0 317 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 OR8S1Q8NH09 359 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 HPSE2Q8WWQ2 592 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 ERGIC1Q969X5 290 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 SPSB1Q96BD6 273 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 MEGF10Q96KG7 1140 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 OR14A2Q96R54 314 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 VRK1Q99986 396 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-205ENST00000466897 MICU1Q9BPX6 476 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 RTL8AQ9BWD3 113 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 TPK1Q9H3S4 243 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 ZCCHC4Q9H5U6 513 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 SAP30LQ9HAJ7 183 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 BARX1Q9HBU1 254 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-205ENST00000466897 MYOZ1Q9NP98 299 aaPredicted RBP12.89□□□□□ -0.35
NPHP4-205ENST00000466897 SPG11Q96JI7 2443 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 ITPR2Q14571 2701 aa12.89□□□□□ -0.35
NPHP4-205ENST00000466897 F5H5P2 479 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 H0YL77 283 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 RGS9O75916 674 aaPredicted RBP12.88□□□□□ -0.35
NPHP4-205ENST00000466897 TFAP2AP05549 437 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 IGFBP3P17936 291 aaPredicted RBP12.88□□□□□ -0.35
NPHP4-205ENST00000466897 MAGEB1P43366 347 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 SOX2P48431 317 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 ALDH3B2P48448 385 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 PTH2RP49190 550 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 GNG3P63215 75 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 MAB21L1Q13394 359 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 UBE2V2Q15819 145 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 DEFB113Q30KQ7 82 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 PLCXD3Q63HM9 321 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 TMEM91Q6ZNR0 172 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 CDH24Q86UP0 819 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 HIST1H2AAQ96QV6 131 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 OR2V2Q96R30 315 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 TLNRD1Q9H1K6 362 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 NEK6Q9HC98 313 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 DECR2Q9NUI1 292 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 FOXJ3Q9UPW0 622 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 CSMD2Q7Z408 3487 aa12.88□□□□□ -0.35
NPHP4-205ENST00000466897 PDZD2O15018 2839 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 TRDV1A0A1B0GX56 115 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 A6NIN4 97 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 IFNL4K9M1U5 179 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 SULT1B1O43704 296 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 NCR1O76036 304 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 UCHL1P09936 223 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 ATF1P18846 271 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 PRKACBP22694 351 aa12.87□□□□□ -0.35
NPHP4-205ENST00000466897 FGF9P31371 208 aaPredicted RBP12.87□□□□□ -0.35
NPHP4-205ENST00000466897 TGFBR2P37173 567 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms