RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 CLDN18P56856 261 aa1.99□□□□□ -2.09
PTPN12-210ENST00000464313 RAB11AP62491 216 aa1.99□□□□□ -2.09
PTPN12-210ENST00000464313 PAFAH1B2P68402 229 aa1.99□□□□□ -2.09
PTPN12-210ENST00000464313 RAB11BQ15907 218 aa1.99□□□□□ -2.09
PTPN12-210ENST00000464313 C5orf64Q2M2E5 130 aa1.99□□□□□ -2.09
PTPN12-210ENST00000464313 HIKESHIQ53FT3 197 aa1.99□□□□□ -2.09
PTPN12-210ENST00000464313 PIP5KL1Q5T9C9 394 aa1.99□□□□□ -2.09
PTPN12-210ENST00000464313 PLCXD3Q63HM9 321 aa1.99□□□□□ -2.09
PTPN12-210ENST00000464313 TBPL2Q6SJ96 375 aa1.99□□□□□ -2.09
PTPN12-210ENST00000464313 ANGPTL8Q6UXH0 198 aa1.99□□□□□ -2.09
PTPN12-210ENST00000464313 TMEM136Q6ZRR5 245 aa1.99□□□□□ -2.09
PTPN12-210ENST00000464313 C1orf64Q8NEQ6 169 aa1.99□□□□□ -2.09
PTPN12-210ENST00000464313 RCN3Q96D15 328 aa1.99□□□□□ -2.09
PTPN12-210ENST00000464313 RDH12Q96NR8 316 aa1.99□□□□□ -2.09
PTPN12-210ENST00000464313 IQCGQ9H095 443 aaKnown RBP1.99□□□□□ -2.09
PTPN12-210ENST00000464313 DYRK4Q9NR20 520 aa1.99□□□□□ -2.09
PTPN12-210ENST00000464313 BAZ2AQ9UIF9 1905 aaKnown RBP1.99□□□□□ -2.09
PTPN12-210ENST00000464313 TRIP11Q15643 1979 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 SLC22A20A6NK97 555 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 CENPBD1B2RD01 187 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 PRAMEF26H0Y7S4 382 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 PSPHP1O15172 72 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 HSBP1O75506 76 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 NELFEP18615 380 aaKnown RBP1.98□□□□□ -2.09
PTPN12-210ENST00000464313 GABRR2P28476 465 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 PCK1P35558 622 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 CLDN8P56748 225 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 RPS11P62280 158 aaKnown RBP eCLIP1.98□□□□□ -2.09
PTPN12-210ENST00000464313 INCA1Q0VD86 236 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 MAD2L1BPQ15013 274 aaPredicted RBP1.98□□□□□ -2.09
PTPN12-210ENST00000464313 STEAP4Q687X5 459 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 BRD3OSQ6XYD6 125 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 TMCO2Q7Z6W1 182 aaPredicted RBP1.98□□□□□ -2.09
PTPN12-210ENST00000464313 SLC25A29Q8N8R3 303 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 PROKR2Q8NFJ6 384 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 OR4M2Q8NGB6 313 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 PEX13Q92968 403 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 NAT6Q93015 286 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 CERS2Q96G23 380 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 CSPG4P5Q96PW8 444 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 SHANK2-AS3Q9BTD1 123 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 SFXN3Q9BWM7 321 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 CA10Q9NS85 328 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 ZMAT5Q9UDW3 170 aaKnown RBP1.98□□□□□ -2.09
PTPN12-210ENST00000464313 CES1P1Q9UKY3 287 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 NDRG2Q9UN36 371 aaKnown RBP1.98□□□□□ -2.09
PTPN12-210ENST00000464313 OR51B2Q9Y5P1 312 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 C2orf16Q68DN1 1984 aa1.98□□□□□ -2.09
PTPN12-210ENST00000464313 LOC102724200A0A096LPH7 203 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-210ENST00000464313 A0A0B4J2E0 115 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 HACD1B0YJ81 288 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 LINC01619G3V211 115 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 OR7C2O60412 319 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 CCDC22O60826 627 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 PTTG1O95997 202 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 IGKV1-39P01597 117 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 IGKV1D-39P04432 117 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 PMCHP20382 165 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 CXCR1P25024 350 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 MPV17P39210 176 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 BAMBIQ13145 260 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 SP6Q3SY56 376 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 MLIPQ5VWP3 458 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 MFSD14CQ5VZR4 134 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 TTC19Q6DKK2 380 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-210ENST00000464313 FAM131AQ6UXB0 335 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 LINC00336Q6ZUF6 198 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 DAZ4Q86SG3 579 aaKnown RBP1.97□□□□□ -2.09
PTPN12-210ENST00000464313 SGPP2Q8IWX5 399 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 WDR31Q8NA23 367 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 ZNF680Q8NEM1 530 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 PIH1D2Q8WWB5 315 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 ZNF707Q96C28 371 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-210ENST00000464313 ALS2CR12Q96Q35 445 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 TMEM175Q9BSA9 504 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 DAZ1Q9NQZ3 744 aaKnown RBP1.97□□□□□ -2.09
PTPN12-210ENST00000464313 HEBP1Q9NRV9 189 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 TREX1Q9NSU2 369 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 DDX18Q9NVP1 670 aaKnown RBP1.97□□□□□ -2.09
PTPN12-210ENST00000464313 ADA2Q9NZK5 511 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 RABL2AQ9UBK7 228 aaPredicted RBP1.97□□□□□ -2.09
PTPN12-210ENST00000464313 RWDD2AQ9UIY3 292 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 TICRRQ7Z2Z1 1910 aa1.97□□□□□ -2.09
PTPN12-210ENST00000464313 BRCA1P38398 1863 aaKnown RBP1.97□□□□□ -2.09
PTPN12-210ENST00000464313 SEC16AO15027 2179 aa1.96□□□□□ -2.1
PTPN12-210ENST00000464313 IGKV1-6A0A0C4DH72 117 aa1.96□□□□□ -2.1
PTPN12-210ENST00000464313 A0A1B0GTQ1 180 aa1.96□□□□□ -2.1
PTPN12-210ENST00000464313 H3BN98 237 aa1.96□□□□□ -2.1
PTPN12-210ENST00000464313 CLDN34H7C241 214 aa1.96□□□□□ -2.1
PTPN12-210ENST00000464313 TRDMT1O14717 391 aaKnown RBP1.96□□□□□ -2.1
PTPN12-210ENST00000464313 SCO1O75880 301 aa1.96□□□□□ -2.1
PTPN12-210ENST00000464313 PTHP01270 115 aa1.96□□□□□ -2.1
PTPN12-210ENST00000464313 COL8A2P25067 703 aa1.96□□□□□ -2.1
PTPN12-210ENST00000464313 IL3RAP26951 378 aa1.96□□□□□ -2.1
PTPN12-210ENST00000464313 CLDN6P56747 220 aa1.96□□□□□ -2.1
PTPN12-210ENST00000464313 PPP1CAP62136 330 aa1.96□□□□□ -2.1
PTPN12-210ENST00000464313 LCN2P80188 198 aa1.96□□□□□ -2.1
PTPN12-210ENST00000464313 FLI1Q01543 452 aaPredicted RBP1.96□□□□□ -2.1
PTPN12-210ENST00000464313 KDSRQ06136 332 aa1.96□□□□□ -2.1
PTPN12-210ENST00000464313 BTN1A1Q13410 526 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms