RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 C12orf43Q96C57 262 aaKnown RBP18.19■□□□□ 0.5
CPSF7-208ENST00000450000 NRBF2Q96F24 287 aa18.19■□□□□ 0.5
CPSF7-208ENST00000450000 YIPF3Q9GZM5 350 aa18.19■□□□□ 0.5
CPSF7-208ENST00000450000 ONECUT1Q9UBC0 465 aa18.19■□□□□ 0.5
CPSF7-208ENST00000450000 LRP12Q9Y561 859 aa18.19■□□□□ 0.5
CPSF7-208ENST00000450000 TMEM14AQ9Y6G1 99 aa18.19■□□□□ 0.5
CPSF7-208ENST00000450000 TMEM269A0A1B0GVZ9 245 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 TCRBV3S1A0A5B6 114 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 POM121CA8CG34 1229 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 SRRM5B3KS81 715 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 TNFRSF13BO14836 293 aaPredicted RBP18.18■□□□□ 0.5
CPSF7-208ENST00000450000 GPR37O15354 613 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 GSC2O15499 205 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 CST4P01036 141 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 MRPL3P09001 348 aaKnown RBP18.18■□□□□ 0.5
CPSF7-208ENST00000450000 MAP2K3P46734 347 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 CRISP1P54107 249 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 IKZF1Q13422 519 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 C11orf53Q8IXP5 236 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 OR8B12Q8NGG6 310 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 OR10Z1Q8NGY1 313 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 TBC1D15Q8TC07 691 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 RPL3LQ92901 407 aaKnown RBP18.18■□□□□ 0.5
CPSF7-208ENST00000450000 ITPKCQ96DU7 683 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 TBX15Q96SF7 602 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 PKP2Q99959 881 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 ACOXLQ9NUZ1 547 aa18.18■□□□□ 0.5
CPSF7-208ENST00000450000 CENPVL3A0A0U1RRI6 287 aa18.17■□□□□ 0.5
CPSF7-208ENST00000450000 ACOD1A6NK06 481 aa18.17■□□□□ 0.5
CPSF7-208ENST00000450000 ALOX5APP20292 161 aa18.17■□□□□ 0.5
CPSF7-208ENST00000450000 ACTR3P61158 418 aa18.17■□□□□ 0.5
CPSF7-208ENST00000450000 DEGS2Q6QHC5 323 aa18.17■□□□□ 0.5
CPSF7-208ENST00000450000 OR5P3Q8WZ94 311 aa18.17■□□□□ 0.5
CPSF7-208ENST00000450000 H1FXQ92522 213 aaKnown RBP18.17■□□□□ 0.5
CPSF7-208ENST00000450000 TMIGD2Q96BF3 282 aa18.17■□□□□ 0.5
CPSF7-208ENST00000450000 TEAD3Q99594 435 aa18.17■□□□□ 0.5
CPSF7-208ENST00000450000 PPP1R3EQ9H7J1 279 aa18.17■□□□□ 0.5
CPSF7-208ENST00000450000 HAO2Q9NYQ3 351 aa18.17■□□□□ 0.5
CPSF7-208ENST00000450000 RPUSD1Q9UJJ7 312 aaKnown RBP18.17■□□□□ 0.5
CPSF7-208ENST00000450000 IKZF2Q9UKS7 526 aa18.17■□□□□ 0.5
CPSF7-208ENST00000450000 KLHDC2Q9Y2U9 406 aa18.17■□□□□ 0.5
CPSF7-208ENST00000450000 FAM96BQ9Y3D0 163 aa18.17■□□□□ 0.5
CPSF7-208ENST00000450000 IGHV1-69DA0A0B4J2H0 117 aa18.16■□□□□ 0.5
CPSF7-208ENST00000450000 ZNF816-ZNF321PA0A0X1KG74 233 aa18.16■□□□□ 0.5
CPSF7-208ENST00000450000 PSMD9O00233 223 aa18.16■□□□□ 0.5
CPSF7-208ENST00000450000 IGHV1-69P01742 117 aa18.16■□□□□ 0.5
CPSF7-208ENST00000450000 RASSF2P50749 326 aa18.16■□□□□ 0.5
CPSF7-208ENST00000450000 RIDAP52758 137 aaKnown RBP18.16■□□□□ 0.5
CPSF7-208ENST00000450000 HCCSP53701 268 aa18.16■□□□□ 0.5
CPSF7-208ENST00000450000 ZNF829Q3KNS6 432 aaPredicted RBP18.16■□□□□ 0.5
CPSF7-208ENST00000450000 CDONQ4KMG0 1287 aa18.16■□□□□ 0.5
CPSF7-208ENST00000450000 Q6YL49 198 aa18.16■□□□□ 0.5
CPSF7-208ENST00000450000 FAM216BQ8N7L0 139 aa18.16■□□□□ 0.5
CPSF7-208ENST00000450000 OR5T2Q8NGG2 359 aa18.16■□□□□ 0.5
CPSF7-208ENST00000450000 OR5K1Q8NHB7 308 aa18.16■□□□□ 0.5
CPSF7-208ENST00000450000 ASB17Q8WXJ9 295 aa18.16■□□□□ 0.5
CPSF7-208ENST00000450000 MED30Q96HR3 178 aa18.16■□□□□ 0.5
CPSF7-208ENST00000450000 TLNRD1Q9H1K6 362 aa18.16■□□□□ 0.5
CPSF7-208ENST00000450000 SNTG1Q9NSN8 517 aa18.16■□□□□ 0.5
CPSF7-208ENST00000450000 GTF2A1LQ9UNN4 478 aa18.16■□□□□ 0.5
CPSF7-208ENST00000450000 CAB39Q9Y376 341 aaPredicted RBP18.16■□□□□ 0.5
CPSF7-208ENST00000450000 KPTNQ9Y664 436 aa18.16■□□□□ 0.5
CPSF7-208ENST00000450000 A0A1B0GVI7 797 aa18.15■□□□□ 0.5
CPSF7-208ENST00000450000 ZNF254O75437 659 aa18.15■□□□□ 0.5
CPSF7-208ENST00000450000 MMP9P14780 707 aa18.15■□□□□ 0.5
CPSF7-208ENST00000450000 OMGP23515 440 aa18.15■□□□□ 0.5
CPSF7-208ENST00000450000 ACKR3P25106 362 aa18.15■□□□□ 0.5
CPSF7-208ENST00000450000 ESRRGP62508 458 aa18.15■□□□□ 0.5
CPSF7-208ENST00000450000 RIPPLY1Q0D2K3 151 aa18.15■□□□□ 0.5
CPSF7-208ENST00000450000 PTGES3Q15185 160 aaKnown RBP18.15■□□□□ 0.5
CPSF7-208ENST00000450000 FIP1L1Q6UN15 594 aaKnown RBP18.15■□□□□ 0.5
CPSF7-208ENST00000450000 PDZD9Q8IXQ8 264 aa18.15■□□□□ 0.5
CPSF7-208ENST00000450000 TMEM86BQ8N661 226 aa18.15■□□□□ 0.5
CPSF7-208ENST00000450000 SSMEM1Q8WWF3 244 aa18.15■□□□□ 0.5
CPSF7-208ENST00000450000 ITFG2Q969R8 447 aa18.15■□□□□ 0.5
CPSF7-208ENST00000450000 CNN2Q99439 309 aaKnown RBP18.15■□□□□ 0.5
CPSF7-208ENST00000450000 SIRPDQ9H106 197 aa18.15■□□□□ 0.5
CPSF7-208ENST00000450000 KRT84Q9NSB2 600 aa18.15■□□□□ 0.5
CPSF7-208ENST00000450000 NBEAL1Q6ZS30 2694 aa18.15■□□□□ 0.5
CPSF7-208ENST00000450000 A0A1B0GUS0 222 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 FAM181BA6NEQ2 426 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 AKR7A2O43488 359 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 ATP6V1B1P15313 513 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 SLC2A5P22732 501 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 GLRA1P23415 457 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 EEF1B2P24534 225 aaKnown RBP18.14■□□□□ 0.49
CPSF7-208ENST00000450000 GABRA2P47869 451 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 GPM6AP51674 278 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 GNG3P63215 75 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 VMO1Q7Z5L0 202 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 OR4F5Q8NH21 305 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 ZNF671Q8TAW3 534 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 SLC7A6OSQ96CW6 309 aaPredicted RBP18.14■□□□□ 0.49
CPSF7-208ENST00000450000 SEH1LQ96EE3 360 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 LYZL4Q96KX0 146 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 PBOV1Q9GZY1 135 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 DNTTIP1Q9H147 329 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 PRDM13Q9H4Q3 707 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 BEX1Q9HBH7 125 aa18.14■□□□□ 0.49
CPSF7-208ENST00000450000 POMT1Q9Y6A1 747 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms