RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 ACTR6Q9GZN1 396 aa4.07□□□□□ -1.76
PTPN4-206ENST00000441089 ZMAT3Q9HA38 289 aaKnown RBP4.07□□□□□ -1.76
PTPN4-206ENST00000441089 NOX3Q9HBY0 568 aa4.07□□□□□ -1.76
PTPN4-206ENST00000441089 PLSCR4Q9NRQ2 329 aa4.07□□□□□ -1.76
PTPN4-206ENST00000441089 INPP5EQ9NRR6 644 aa4.07□□□□□ -1.76
PTPN4-206ENST00000441089 ACOXLQ9NUZ1 547 aa4.07□□□□□ -1.76
PTPN4-206ENST00000441089 PARPBPQ9NWS1 579 aa4.07□□□□□ -1.76
PTPN4-206ENST00000441089 LAMP5Q9UJQ1 280 aa4.07□□□□□ -1.76
PTPN4-206ENST00000441089 FBXL3Q9UKT7 428 aa4.07□□□□□ -1.76
PTPN4-206ENST00000441089 ERGIC3Q9Y282 383 aa4.07□□□□□ -1.76
PTPN4-206ENST00000441089 CAB39Q9Y376 341 aaPredicted RBP4.07□□□□□ -1.76
PTPN4-206ENST00000441089 CEPT1Q9Y6K0 416 aa4.07□□□□□ -1.76
PTPN4-206ENST00000441089 PNMA8CA0A1B0GUJ8 204 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 C5orf63A6NC05 138 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 METTL15A6NJ78 407 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 OR6C65A6NJZ3 312 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 ZNF587BE7ETH6 402 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 H3BSA7 217 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 J3QLW9 94 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 SRSF10O75494 262 aaKnown RBP4.06□□□□□ -1.76
PTPN4-206ENST00000441089 LYZL6O75951 148 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 KRT33AO76009 404 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 PNPP00491 289 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 HLA-HP01893 362 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 CST2P09228 141 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 MMP7P09237 267 aaPredicted RBP4.06□□□□□ -1.76
PTPN4-206ENST00000441089 HSMCR30P0CW71 290 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 VSIG10L2P0DP72 767 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 NR2C1P13056 603 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 ZNF823P16415 610 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 ZNF19P17023 458 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 ZNF32P17041 273 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 NPR2P20594 1047 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 PSMB1P20618 241 aaKnown RBP4.06□□□□□ -1.76
PTPN4-206ENST00000441089 COX5AP20674 150 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 NR4A1P22736 598 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 MPGP29372 298 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 TGFBR1P36897 503 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 OPRL1P41146 370 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 KIR3DL2P43630 455 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 RGS6P49758 472 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 ZNF84P51523 738 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 KRTAP10-11P60412 298 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 RPS25P62851 125 aaKnown RBP4.06□□□□□ -1.76
PTPN4-206ENST00000441089 TUBA1BP68363 451 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 BSPH1Q075Z2 132 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 MFGE8Q08431 387 aaPredicted RBP4.06□□□□□ -1.76
PTPN4-206ENST00000441089 ACSM1Q08AH1 577 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 MLLT11Q13015 90 aaPredicted RBP4.06□□□□□ -1.76
PTPN4-206ENST00000441089 AQP6Q13520 282 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 TPBGQ13641 420 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 TIGD6Q17RP2 521 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 RSPO1Q2MKA7 263 aaPredicted RBP4.06□□□□□ -1.76
PTPN4-206ENST00000441089 KRTAP27-1Q3LI81 207 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 HIKESHIQ53FT3 197 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 FAM27BQ5VT28 67 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 GPR107Q5VW38 600 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 DMKNQ6E0U4 476 aaPredicted RBP4.06□□□□□ -1.76
PTPN4-206ENST00000441089 OR7E24Q6IFN5 339 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 C11orf71Q6IPW1 123 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 ZNF813Q6ZN06 617 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 SLC16A12Q6ZSM3 486 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 TUBA1AQ71U36 451 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 SSX8Q7RTT4 187 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 GPR141Q7Z602 305 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 KLBQ86Z14 1044 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 UBE2J2Q8N2K1 259 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 BPIFB2Q8N4F0 458 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 ZNF433Q8N7K0 673 aaPredicted RBP4.06□□□□□ -1.76
PTPN4-206ENST00000441089 WDR31Q8NA23 367 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 SNX33Q8WV41 574 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 RNF133Q8WVZ7 376 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 RGP1Q92546 391 aaPredicted RBP4.06□□□□□ -1.76
PTPN4-206ENST00000441089 RORBQ92753 470 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 RPL3LQ92901 407 aaKnown RBP4.06□□□□□ -1.76
PTPN4-206ENST00000441089 SLAMF6Q96DU3 332 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 PGLYRP3Q96LB9 341 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 ZNF75AQ96N20 296 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 DCLRE1CQ96SD1 692 aaKnown RBP4.06□□□□□ -1.76
PTPN4-206ENST00000441089 MNTQ99583 582 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 MGLLQ99685 303 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 FUNDC2Q9BWH2 189 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 HDHD5Q9BXW7 423 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 WNT5BQ9H1J7 359 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 OR51E2Q9H255 320 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 C1orf198Q9H425 327 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 SIAEQ9HAT2 523 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 ELOVL3Q9HB03 270 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 ISYNA1Q9NPH2 558 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 B3GAT2Q9NPZ5 323 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 BABAM2Q9NXR7 383 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 UPB1Q9UBR1 384 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 GNG8Q9UK08 70 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 IKZF2Q9UKS7 526 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 POLR1DQ9Y2S0 133 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 SPEF1Q9Y4P9 236 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 LRP12Q9Y561 859 aa4.06□□□□□ -1.76
PTPN4-206ENST00000441089 DYNC2H1Q8NCM8 4307 aaKnown RBP4.06□□□□□ -1.76
PTPN4-206ENST00000441089 A0A1B0GUS0 222 aa4.05□□□□□ -1.76
PTPN4-206ENST00000441089 A0A1W2PR80 420 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms