RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 NDUFA11Q86Y39 141 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 AQP12AQ8IXF9 295 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 C10orf111Q8N326 155 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 CLDN22Q8N7P3 220 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 BOLLQ8N9W6 283 aaKnown RBP7.08□□□□□ -1.28
SCRN1-208ENST00000438497 BPIFB6Q8NFQ5 453 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 OR5L1Q8NGL2 311 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 NFKBIDQ8NI38 313 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 HDAC2Q92769 488 aaKnown RBP7.08□□□□□ -1.28
SCRN1-208ENST00000438497 ERGIC1Q969X5 290 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 ZNF583Q96ND8 569 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 RBM14Q96PK6 669 aaKnown RBP7.08□□□□□ -1.28
SCRN1-208ENST00000438497 KCTD14Q9BQ13 255 aaPredicted RBP7.08□□□□□ -1.28
SCRN1-208ENST00000438497 FUNDC2Q9BWH2 189 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 C6orf62Q9GZU0 229 aaPredicted RBP7.08□□□□□ -1.28
SCRN1-208ENST00000438497 EVA1AQ9H8M9 152 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 ABCB10Q9NRK6 738 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 AIG1Q9NVV5 245 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 ING3Q9NXR8 418 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 PTTG3PQ9NZH4 202 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 CTSZQ9UBR2 303 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 RAP2CQ9Y3L5 183 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 SNX13Q9Y5W8 968 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 SNX5Q9Y5X3 404 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 KPTNQ9Y664 436 aa7.08□□□□□ -1.28
SCRN1-208ENST00000438497 TENM2Q9NT68 2774 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 A0A1W2PPL8 197 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 MEIOCA2RUB1 952 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 CPSF4LA6NMK7 179 aaKnown RBP7.07□□□□□ -1.28
SCRN1-208ENST00000438497 H3BUX3 64 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 NPFFO15130 113 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 OR10H3O60404 316 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 FAM20BO75063 409 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 PTP4A3O75365 173 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 SLC22A3O75751 556 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 HLA-DPB1P04440 258 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 NHLRC4P0CG21 123 aaPredicted RBP7.07□□□□□ -1.28
SCRN1-208ENST00000438497 NR2C1P13056 603 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 FPR3P25089 353 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 FASP25445 335 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 AQP2P41181 271 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 GATA4P43694 442 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 HTR5AP47898 357 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 RAB25P57735 213 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 ABCE1P61221 599 aaKnown RBP7.07□□□□□ -1.28
SCRN1-208ENST00000438497 ADARB1P78563 741 aaKnown RBP7.07□□□□□ -1.28
SCRN1-208ENST00000438497 CDK6Q00534 326 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 FLI1Q01543 452 aaPredicted RBP7.07□□□□□ -1.28
SCRN1-208ENST00000438497 RELQ04864 619 aaPredicted RBP7.07□□□□□ -1.28
SCRN1-208ENST00000438497 PRKCDQ05655 676 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 FADDQ13158 208 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 LAPTM4AQ15012 233 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 OR8B8Q15620 311 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 LY6EQ16553 131 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 KLHL22Q53GT1 634 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 ARMC4Q5T2S8 1044 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 TCTE3Q8IZS6 198 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 DYNC2LI1Q8TCX1 351 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 CYGBQ8WWM9 190 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 CENPNQ96H22 339 aaPredicted RBP7.07□□□□□ -1.28
SCRN1-208ENST00000438497 SSX3Q99909 188 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 CITED2Q99967 270 aaPredicted RBP7.07□□□□□ -1.28
SCRN1-208ENST00000438497 FAM234AQ9H0X4 552 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 PCDHAC1Q9H158 963 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 IFT46Q9NQC8 304 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 UFSP2Q9NUQ7 469 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 RNF7Q9UBF6 113 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 DNAJB11Q9UBS4 358 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 WARS2Q9UGM6 360 aaKnown RBP7.07□□□□□ -1.28
SCRN1-208ENST00000438497 PRELID3BQ9Y3B1 194 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 MAB21L2Q9Y586 359 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 U3KQK5 164 aa7.07□□□□□ -1.28
SCRN1-208ENST00000438497 DYNC2H1Q8NCM8 4307 aaKnown RBP7.07□□□□□ -1.28
SCRN1-208ENST00000438497 TRAV6A0A075B6T7 132 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 EFCAB10A6NFE3 127 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 E9PQ18 207 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 LGALS8O00214 317 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 SOCS2O14508 198 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 DVL1O14640 695 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 SGCEO43556 437 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 APOC1P02654 83 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 OPN1SWP03999 348 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 SCG5P05408 212 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 FAHP16930 419 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 MSR1P21757 451 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 PRB3Q04118 309 aaPredicted RBP7.06□□□□□ -1.28
SCRN1-208ENST00000438497 MAB21L1Q13394 359 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 AQP6Q13520 282 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 ENDOGQ14249 297 aaKnown RBP7.06□□□□□ -1.28
SCRN1-208ENST00000438497 MPPED2Q15777 294 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 CTF1Q16619 201 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 ENTPD8Q5MY95 495 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 SAMD4BQ5PRF9 694 aaKnown RBP7.06□□□□□ -1.28
SCRN1-208ENST00000438497 XAF1Q6GPH4 301 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 METAP1DQ6UB28 335 aaPredicted RBP7.06□□□□□ -1.28
SCRN1-208ENST00000438497 FBXW12Q6X9E4 464 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 HACD2Q6Y1H2 254 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 ZNF782Q6ZMW2 699 aaPredicted RBP7.06□□□□□ -1.28
SCRN1-208ENST00000438497 SLC16A12Q6ZSM3 486 aa7.06□□□□□ -1.28
SCRN1-208ENST00000438497 GDPD3Q7L5L3 318 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms