RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 IGHV3OR15-7A0A075B7D8 119 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 SNTNA6NMZ2 147 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 B4DSR2 109 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 ZNF732B4DXR9 585 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 E9PQ18 207 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 J3QLW9 94 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 DLGAP1O14490 977 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 SLC16A6O15403 523 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 MPZL2O60487 215 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 CRLF1O75462 422 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 SRSF10O75494 262 aaKnown RBP4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 INMTO95050 263 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 IGHV2-70P01814 119 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 DBTP11182 482 aaKnown RBP4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 FAHP16930 419 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 ZNF19P17023 458 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 GABRB1P18505 474 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 CFL1P23528 166 aaKnown RBP4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 ACKR3P25106 362 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 ZFP36P26651 326 aaKnown RBP4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 DCTDP32321 178 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 CD80P33681 288 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 THBS2P35442 1172 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 OR12D2P58182 307 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 BTG1P62324 171 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 ROM1Q03395 351 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 SLC34A1Q06495 639 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 MZT1Q08AG7 82 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 RIPPLY1Q0D2K3 151 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 TMED1Q13445 227 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 CR1LQ2VPA4 569 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 ZNF829Q3KNS6 432 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 CHRFAM7AQ494W8 412 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 CEP78Q5JTW2 689 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 SLC25A30Q5SVS4 291 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 BCL2L15Q5TBC7 163 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 WDR86Q86TI4 376 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 GLCCI1Q86VQ1 547 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 LRRC28Q86X40 367 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 C11orf53Q8IXP5 236 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 ELMOD2Q8IZ81 293 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 BATF2Q8N1L9 274 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 KLHL36Q8N4N3 616 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 DHRSXQ8N5I4 330 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 SPERTQ8NA61 448 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 SEMA6DQ8NFY4 1073 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 OR5T2Q8NGG2 359 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 CNIH3Q8TBE1 160 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 APH1BQ8WW43 257 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 RORBQ92753 470 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 RPL3LQ92901 407 aaKnown RBP4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 LGALS12Q96DT0 336 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 MICU1Q9BPX6 476 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 TMEM246Q9BRR3 403 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 ADI1Q9BV57 179 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 PAPOLGQ9BWT3 736 aaKnown RBP4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 SLC22A4Q9H015 551 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 RGCCQ9H4X1 137 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 DCLRE1BQ9H816 532 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 ISG20L2Q9H9L3 353 aaKnown RBP4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 FN3KRPQ9HA64 309 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 PATZ1Q9HBE1 687 aaKnown RBP4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 GPR173Q9NS66 373 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 C14orf119Q9NWQ9 140 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 HIF1ANQ9NWT6 349 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 RNF7Q9UBF6 113 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 NUFIP1Q9UHK0 495 aaKnown RBP4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 EXOGQ9Y2C4 368 aaKnown RBP4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 RPL36Q9Y3U8 105 aaKnown RBP4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 R4GMQ9 66 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 ITPR3Q14573 2671 aa4.84□□□□□ -1.63
HMGB3P24-201ENST00000433260 CCDC168Q8NDH2 2452 aa4.84□□□□□ -1.64
HMGB3P24-201ENST00000433260 F8P00451 2351 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 ZNF816-ZNF321PA0A0X1KG74 233 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 A0A1B0GTI1 187 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 A0A1B0GWJ7 208 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 ACOD1A6NK06 481 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 ANXA2P2A6NMY6 339 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 H0YHG0 523 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 TRAPPC2LH3BP13 241 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 J3QRE1 110 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 PHF1O43189 567 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 AKR7A2O43488 359 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 SYT7O43581 403 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 WBP4O75554 376 aaKnown RBP4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 MTRF1O75570 445 aaKnown RBP4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 CST4P01036 141 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 NRASP01111 189 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 IGHV2-5P01817 119 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 TFF1P04155 84 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 MSMBP08118 114 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 HTR1AP08908 422 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 WNT2P09544 360 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 EGR1P18146 543 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 MDH2P40926 338 aaKnown RBP4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 GPM6AP51674 278 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 DVL1P1P54792 670 aaPredicted RBP4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 NANOS3P60323 173 aaKnown RBP4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 ISL1P61371 349 aa4.83□□□□□ -1.64
HMGB3P24-201ENST00000433260 CSNK2BP67870 215 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms