RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ATXN7O15265 892 aaPredicted RBP11.03□□□□□ -0.64
CDH3-202ENST00000429102 TSPAN2O60636 221 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 CLDN17P56750 224 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 IGLV3-21P80748 117 aaPredicted RBP11.03□□□□□ -0.64
CDH3-202ENST00000429102 DNM1P46Q6ZS02 220 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 OR13G1Q8NGZ3 307 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 TMEM230Q96A57 120 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 SLCO5A1Q9H2Y9 848 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 PARPBPQ9NWS1 579 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 MMP17Q9ULZ9 603 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 CACNA1DQ01668 2161 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 hCG_1809904A0A1W2PP81 198 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 A0A1W2PR64 198 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 A0A1W2PRV1 198 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 RNASEK-C17orf49H0YIS7 233 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 NUDT21O43809 227 aaKnown RBP11.03□□□□□ -0.64
CDH3-202ENST00000429102 CDC14BO60729 498 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 EIF3GO75821 320 aaKnown RBP eCLIP11.03□□□□□ -0.64
CDH3-202ENST00000429102 OR2J2O76002 312 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 SNAPINO95295 136 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 CD74P04233 296 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 NQO2P16083 231 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 GABREP78334 506 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 FBXO46Q6PJ61 603 aaPredicted RBP11.03□□□□□ -0.64
CDH3-202ENST00000429102 SLC38A9Q8NBW4 561 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 IP6K3Q96PC2 410 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.03□□□□□ -0.64
CDH3-202ENST00000429102 GPR173Q9NS66 373 aa11.03□□□□□ -0.64
CDH3-202ENST00000429102 MBTPS2O43462 519 aa11.02□□□□□ -0.64
CDH3-202ENST00000429102 GUSBP08236 651 aa11.02□□□□□ -0.64
CDH3-202ENST00000429102 HOXC4P09017 264 aaPredicted RBP11.02□□□□□ -0.64
CDH3-202ENST00000429102 PTGFRP43088 359 aa11.02□□□□□ -0.64
CDH3-202ENST00000429102 DAP3P51398 398 aaKnown RBP11.02□□□□□ -0.64
CDH3-202ENST00000429102 ACY1Q03154 408 aa11.02□□□□□ -0.64
CDH3-202ENST00000429102 ZNF160Q9HCG1 818 aa11.02□□□□□ -0.64
CDH3-202ENST00000429102 CHST11Q9NPF2 352 aa11.02□□□□□ -0.64
CDH3-202ENST00000429102 SDHAF3Q9NRP4 125 aa11.02□□□□□ -0.64
CDH3-202ENST00000429102 FAM206AQ9NX38 181 aa11.02□□□□□ -0.64
CDH3-202ENST00000429102 WNT16Q9UBV4 365 aa11.02□□□□□ -0.64
CDH3-202ENST00000429102 GPR179Q6PRD1 2367 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 RAB19A4D1S5 217 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 K7EPK0 472 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 EFNA2O43921 213 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 HIST1H1DP16402 221 aaKnown RBP11.02□□□□□ -0.65
CDH3-202ENST00000429102 FCGR2CP31995 323 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 RAB5BP61020 215 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 OGFOD3Q6PK18 319 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 P4HA3Q7Z4N8 544 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 FAM71E2Q8N5Q1 922 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 OR5L1Q8NGL2 311 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 SPSB2Q99619 263 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 FAAP24Q9BTP7 215 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 RGCCQ9H4X1 137 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 PCDHGA1Q9Y5H4 931 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 PUS1Q9Y606 427 aaKnown RBP eCLIP11.02□□□□□ -0.65
CDH3-202ENST00000429102 A6NLC8 198 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 C1orf196B1AJZ1 125 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 IGHV3-9P01782 118 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 CELA2AP08217 269 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 CCNOP22674 350 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 HSD11B2P80365 405 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 PEG10Q86TG7 708 aaKnown RBP11.02□□□□□ -0.65
CDH3-202ENST00000429102 SGK3Q96BR1 496 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 OR10A2Q9H208 303 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 LMAN1LQ9HAT1 526 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 SLC17A5Q9NRA2 495 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 C14orf166Q9Y224 244 aaKnown RBP11.02□□□□□ -0.65
CDH3-202ENST00000429102 LHFPL6Q9Y693 200 aa11.02□□□□□ -0.65
CDH3-202ENST00000429102 NCOA6Q14686 2063 aaPredicted RBP11.01□□□□□ -0.65
CDH3-202ENST00000429102 PRSS44E7EML9 344 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 MTRF1O75570 445 aaKnown RBP11.01□□□□□ -0.65
CDH3-202ENST00000429102 TSPAN15O95858 294 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 SLC25A4P12235 298 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 MRPS21P82921 87 aaKnown RBP11.01□□□□□ -0.65
CDH3-202ENST00000429102 LPCAT3Q6P1A2 487 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 NKAIN3Q8N8D7 197 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 LIPHQ8WWY8 451 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 MRPL24Q96A35 216 aaKnown RBP11.01□□□□□ -0.65
CDH3-202ENST00000429102 NECAB3Q96P71 396 aaPredicted RBP11.01□□□□□ -0.65
CDH3-202ENST00000429102 NAA11Q9BSU3 229 aaPredicted RBP11.01□□□□□ -0.65
CDH3-202ENST00000429102 ZNF700Q9H0M5 742 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 ZFP57Q9NU63 452 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 C2CD4DB7Z1M9 353 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 C3orf80F5H4A9 247 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 TIAF1O95411 115 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 CFHR1Q03591 330 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 PJVKQ0ZLH3 352 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 C9orf135Q5VTT2 229 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 FAM24BQ8N5W8 94 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 RNF133Q8WVZ7 376 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 NRIP2Q9BQI9 281 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 URM1Q9BTM9 101 aaKnown RBP11.01□□□□□ -0.65
CDH3-202ENST00000429102 EDEM2Q9BV94 578 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 BCL2L14Q9BZR8 327 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 SPACA1Q9HBV2 294 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 PLEK2Q9NYT0 353 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 FBXL17Q9UF56 701 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 RPL12P30050 165 aaKnown RBP11.01□□□□□ -0.65
CDH3-202ENST00000429102 CBX5P45973 191 aa11.01□□□□□ -0.65
CDH3-202ENST00000429102 KISS1Q15726 138 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms