RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 CHCHD2Q9Y6H1 151 aaPredicted RBP13.09□□□□□ -0.31
SEMA4D-204ENST00000420101 CACNA1HO95180 2353 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 FAM157AC9JC47 383 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 G3V3Y1 287 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 F12P00748 615 aaPredicted RBP13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 SERPINA7P05543 415 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 FSTP19883 344 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 APOBEC1P41238 236 aaKnown RBP13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 GSK3AP49840 483 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 NOVA1P51513 510 aaKnown RBP13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 EFNB2P52799 333 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 CTXN1P60606 82 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 RPS4XP62701 263 aaKnown RBP13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 Q0VFX4 171 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 FOXF1Q12946 379 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 PPP1R1AQ13522 171 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 ATXN7L3Q14CW9 347 aaPredicted RBP13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 ACER2Q5QJU3 275 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 C1orf140Q5VVS0 124 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 C1QL3Q5VWW1 255 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 ADGRE4PQ86SQ3 457 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 LIPHQ8WWY8 451 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 CLCC1Q96S66 551 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 NMNAT3Q96T66 252 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 GGACTQ9BVM4 153 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 OR11A1Q9GZK7 315 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 SMDT1Q9H4I9 107 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 FKRPQ9H9S5 495 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 DCAF16Q9NXF7 216 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 VSIG4Q9Y279 399 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 HEATR5AQ86XA9 2040 aa13.08□□□□□ -0.32
SEMA4D-204ENST00000420101 FRYLO94915 3013 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 SHISA8B8ZZ34 492 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 C11orf98E9PRG8 122 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 ADAM10O14672 748 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 OR6A2O95222 327 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 WISP1O95388 367 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 TXNDC12O95881 172 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 GAPDHP04406 335 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 F13BP05160 661 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 ITGA5P08648 1049 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 OR8G3PP0DMU2 310 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 CCL3P10147 92 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 GPX4P36969 197 aaPredicted RBP13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 HGFACQ04756 655 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 ZNF239Q16600 458 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 EXD3Q8N9H8 876 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 OR51L1Q8NGJ5 315 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 OR1J1Q8NGS3 322 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 RNASE11Q8TAA1 199 aaKnown RBP13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 DDIT4LQ96D03 193 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 SCGB3A2Q96PL1 93 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 SLC6A7Q99884 636 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 SELENOIQ9C0D9 397 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 WDR76Q9H967 626 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 SERINC1Q9NRX5 453 aa13.07□□□□□ -0.32
SEMA4D-204ENST00000420101 TXNL1O43396 289 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 PPIHO43447 177 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 DKK1O94907 266 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 BGLAPP02818 100 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 P04436 131 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 HOXB5P09067 269 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 ASAH2BP0C7U1 165 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 HOXA5P20719 270 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 ITGA3P26006 1051 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 HTR2CP28335 458 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 RPL18Q07020 188 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 ZNF585AQ6P3V2 769 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 KDM8Q8N371 416 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 OR2M3Q8NG83 312 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 RNF138Q8WVD3 245 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 ASB17Q8WXJ9 295 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 NKD1Q969G9 470 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 C4orf45Q96LM5 186 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 RNF126Q9BV68 326 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 CST11Q9H112 138 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 HRH4Q9H3N8 390 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 BCO1Q9HAY6 547 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 RPS10P5Q9NQ39 176 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 PPP1R14DQ9NXH3 145 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 GRHPRQ9UBQ7 328 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 IL17BQ9UHF5 180 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 LAMP5Q9UJQ1 280 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 HIF3AQ9Y2N7 669 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 C5orf51A6NDU8 294 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 H3BML4 177 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 RPP14O95059 124 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 MT-ATP6P00846 226 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 CBR1P16152 277 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 BTF3P20290 206 aaKnown RBP13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 S100A2P29034 98 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 CDX1P47902 265 aaPredicted RBP13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 UCP2P55851 309 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 PLA2G7Q13093 441 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 CHAF1BQ13112 559 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 ZNF124Q15973 351 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 SCGB2B2Q4G0G5 96 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 OR52W1Q6IF63 320 aa13.06□□□□□ -0.32
SEMA4D-204ENST00000420101 AQP3Q92482 292 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms