RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 A0A1W2PRM7 423 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 TCRBV5S2A0A599 114 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 SLC22A31A6NKX4 558 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 RIIAD1A6NNX1 92 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 NPFFO15130 113 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 TSPAN9O75954 239 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 TSPAN15O95858 294 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 GSTT1P30711 240 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 OPRL1P41146 370 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 GMFBP60983 142 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 IL5RAQ01344 420 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 GUCA2AQ02747 115 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 KLRD1Q13241 179 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 MICAQ29983 383 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 LRRC10Q5BKY1 277 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 CPLX4Q7Z7G2 160 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 TIGD4Q8IY51 512 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 RPL3LQ92901 407 aaKnown RBP12.15□□□□□ -0.46
RPS28-201ENST00000417088 PGAM5Q96HS1 289 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 PKP2Q99959 881 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 SNTG1Q9NSN8 517 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 NDE1Q9NXR1 346 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 VPREB3Q9UKI3 123 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 MPC1Q9Y5U8 109 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 U3KQV3 271 aa12.15□□□□□ -0.46
RPS28-201ENST00000417088 ZNF816-ZNF321PA0A0X1KG74 233 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 BTBD17A6NE02 478 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 ANXA2P2A6NMY6 339 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 GLCEO94923 617 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 TFF1P04155 84 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 H2BFMP0C1H6 154 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 ZNF3P17036 446 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 EEF1B2P24534 225 aaKnown RBP12.14□□□□□ -0.47
RPS28-201ENST00000417088 ACKR3P25106 362 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 MXRA7P84157 204 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 PRDX4Q13162 271 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 DHRS7BQ6IAN0 325 aaPredicted RBP12.14□□□□□ -0.47
RPS28-201ENST00000417088 OR2T5Q6IEZ7 315 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 CD300LDQ6UXZ3 194 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 ZNF788Q6ZQV5 615 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 SHFQ7M4L6 423 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 PNKDQ8N490 385 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 OR10Z1Q8NGY1 313 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 OR2T29Q8NH02 315 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 OR5P3Q8WZ94 311 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 H1FXQ92522 213 aaKnown RBP12.14□□□□□ -0.47
RPS28-201ENST00000417088 GAFA1Q96PS6 74 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 RAB3IPQ96QF0 476 aaPredicted RBP12.14□□□□□ -0.47
RPS28-201ENST00000417088 RTL8AQ9BWD3 113 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 FGF23Q9GZV9 251 aaPredicted RBP12.14□□□□□ -0.47
RPS28-201ENST00000417088 DNTTIP1Q9H147 329 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 RGCCQ9H4X1 137 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 MAGIXQ9H6Y5 334 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 ZNF391Q9UJN7 358 aa12.14□□□□□ -0.47
RPS28-201ENST00000417088 SAMHD1Q9Y3Z3 626 aaKnown RBP12.14□□□□□ -0.47
RPS28-201ENST00000417088 TMEM210A6NLX4 147 aa12.13□□□□□ -0.47
RPS28-201ENST00000417088 ZNF850A8MQ14 1090 aa12.13□□□□□ -0.47
RPS28-201ENST00000417088 CST4P01036 141 aa12.13□□□□□ -0.47
RPS28-201ENST00000417088 TGFBR2P37173 567 aa12.13□□□□□ -0.47
RPS28-201ENST00000417088 SNCBQ16143 134 aa12.13□□□□□ -0.47
RPS28-201ENST00000417088 DGUOKQ16854 277 aa12.13□□□□□ -0.47
RPS28-201ENST00000417088 FAM76BQ5HYJ3 339 aa12.13□□□□□ -0.47
RPS28-201ENST00000417088 C1orf122Q6ZSJ8 110 aa12.13□□□□□ -0.47
RPS28-201ENST00000417088 FTMTQ8N4E7 242 aa12.13□□□□□ -0.47
RPS28-201ENST00000417088 IQCF1Q8N6M8 205 aa12.13□□□□□ -0.47
RPS28-201ENST00000417088 ANGPTL6Q8NI99 470 aa12.13□□□□□ -0.47
RPS28-201ENST00000417088 OTULINQ96BN8 352 aa12.13□□□□□ -0.47
RPS28-201ENST00000417088 MED30Q96HR3 178 aa12.13□□□□□ -0.47
RPS28-201ENST00000417088 LYZL4Q96KX0 146 aa12.13□□□□□ -0.47
RPS28-201ENST00000417088 NIPSNAP1Q9BPW8 284 aa12.13□□□□□ -0.47
RPS28-201ENST00000417088 REEP1Q9H902 201 aa12.13□□□□□ -0.47
RPS28-201ENST00000417088 NKX6-3A6NJ46 265 aa12.12□□□□□ -0.47
RPS28-201ENST00000417088 SIGLEC5O15389 551 aa12.12□□□□□ -0.47
RPS28-201ENST00000417088 AKR7A2O43488 359 aa12.12□□□□□ -0.47
RPS28-201ENST00000417088 DCTDP32321 178 aa12.12□□□□□ -0.47
RPS28-201ENST00000417088 SAA4P35542 130 aa12.12□□□□□ -0.47
RPS28-201ENST00000417088 UBE2E1P51965 193 aa12.12□□□□□ -0.47
RPS28-201ENST00000417088 EGR3Q06889 387 aa12.12□□□□□ -0.47
RPS28-201ENST00000417088 C1QL4Q86Z23 238 aa12.12□□□□□ -0.47
RPS28-201ENST00000417088 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.12□□□□□ -0.47
RPS28-201ENST00000417088 OR10G2Q8NGC3 310 aa12.12□□□□□ -0.47
RPS28-201ENST00000417088 OTOSQ8NHW6 89 aa12.12□□□□□ -0.47
RPS28-201ENST00000417088 FAM110DQ8TAY7 271 aaPredicted RBP12.12□□□□□ -0.47
RPS28-201ENST00000417088 TEX47Q8TBZ9 253 aa12.12□□□□□ -0.47
RPS28-201ENST00000417088 HPSE2Q8WWQ2 592 aa12.12□□□□□ -0.47
RPS28-201ENST00000417088 PIGCQ92535 297 aa12.12□□□□□ -0.47
RPS28-201ENST00000417088 RNF170Q96K19 258 aa12.12□□□□□ -0.47
RPS28-201ENST00000417088 OR51V1Q9H2C8 321 aa12.12□□□□□ -0.47
RPS28-201ENST00000417088 ABCB9Q9NP78 766 aa12.12□□□□□ -0.47
RPS28-201ENST00000417088 SLC25A10Q9UBX3 287 aaPredicted RBP12.12□□□□□ -0.47
RPS28-201ENST00000417088 ARL2BPQ9Y2Y0 163 aa12.12□□□□□ -0.47
RPS28-201ENST00000417088 MEIOCA2RUB1 952 aa12.11□□□□□ -0.47
RPS28-201ENST00000417088 M0R1W7 72 aa12.11□□□□□ -0.47
RPS28-201ENST00000417088 SELENOFO60613 162 aa12.11□□□□□ -0.47
RPS28-201ENST00000417088 PAHP00439 452 aa12.11□□□□□ -0.47
RPS28-201ENST00000417088 LYNP07948 512 aa12.11□□□□□ -0.47
RPS28-201ENST00000417088 ACAA1P09110 424 aaPredicted RBP12.11□□□□□ -0.47
RPS28-201ENST00000417088 CAV3P56539 151 aa12.11□□□□□ -0.47
RPS28-201ENST00000417088 MS4A2Q01362 244 aa12.11□□□□□ -0.47
RPS28-201ENST00000417088 ACSM1Q08AH1 577 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms