RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 SSX3Q99909 188 aa13.66□□□□□ -0.22
MRPL55-220ENST00000411464 RTL8AQ9BWD3 113 aa13.66□□□□□ -0.22
MRPL55-220ENST00000411464 TLNRD1Q9H1K6 362 aa13.66□□□□□ -0.22
MRPL55-220ENST00000411464 TOR3AQ9H497 397 aa13.66□□□□□ -0.22
MRPL55-220ENST00000411464 CCDC134Q9H6E4 229 aa13.66□□□□□ -0.22
MRPL55-220ENST00000411464 SLC25A10Q9UBX3 287 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-220ENST00000411464 SF3B6Q9Y3B4 125 aaKnown RBP13.66□□□□□ -0.22
MRPL55-220ENST00000411464 hCG_38984A0A1B0GV85 526 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 PRB2P02812 416 aaPredicted RBP13.65□□□□□ -0.22
MRPL55-220ENST00000411464 GYPBP06028 91 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 EFNB2P52799 333 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 BLVRAP53004 296 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 EIF2B1Q14232 305 aaKnown RBP13.65□□□□□ -0.22
MRPL55-220ENST00000411464 GFOD2Q3B7J2 385 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 Q6ZPA2 131 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 ZNF788Q6ZQV5 615 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 DTX3Q8N9I9 347 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 OR6K6Q8NGW6 343 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 OR10Z1Q8NGY1 313 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 OR2T6Q8NHC8 308 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 DUS3LQ96G46 650 aaKnown RBP13.65□□□□□ -0.22
MRPL55-220ENST00000411464 RAB3IPQ96QF0 476 aaPredicted RBP13.65□□□□□ -0.22
MRPL55-220ENST00000411464 WDR13Q9H1Z4 485 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 OR10A2Q9H208 303 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 PPP1R3EQ9H7J1 279 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 RAB18Q9NP72 206 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 IL1RAPQ9NPH3 570 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 IL20Q9NYY1 176 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 MAGEL2Q9UJ55 1249 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 FOXJ3Q9UPW0 622 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 MAB21L2Q9Y586 359 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 MPC1Q9Y5U8 109 aa13.65□□□□□ -0.22
MRPL55-220ENST00000411464 H0YAE9 185 aa13.64□□□□□ -0.23
MRPL55-220ENST00000411464 KRT36O76013 467 aa13.64□□□□□ -0.23
MRPL55-220ENST00000411464 SPI1P17947 270 aa13.64□□□□□ -0.23
MRPL55-220ENST00000411464 CRMP1Q14194 572 aa13.64□□□□□ -0.23
MRPL55-220ENST00000411464 LY6EQ16553 131 aa13.64□□□□□ -0.23
MRPL55-220ENST00000411464 DGUOKQ16854 277 aa13.64□□□□□ -0.23
MRPL55-220ENST00000411464 KCTD8Q6ZWB6 473 aa13.64□□□□□ -0.23
MRPL55-220ENST00000411464 LINC00471Q8N535 108 aa13.64□□□□□ -0.23
MRPL55-220ENST00000411464 OR5D13Q8NGL4 314 aa13.64□□□□□ -0.23
MRPL55-220ENST00000411464 CFHR4Q92496 578 aa13.64□□□□□ -0.23
MRPL55-220ENST00000411464 RPL3LQ92901 407 aaKnown RBP13.64□□□□□ -0.23
MRPL55-220ENST00000411464 PPP1R14AQ96A00 147 aa13.64□□□□□ -0.23
MRPL55-220ENST00000411464 ITPKCQ96DU7 683 aa13.64□□□□□ -0.23
MRPL55-220ENST00000411464 CLPTM1LQ96KA5 538 aa13.64□□□□□ -0.23
MRPL55-220ENST00000411464 RGCCQ9H4X1 137 aa13.64□□□□□ -0.23
MRPL55-220ENST00000411464 BRD7Q9NPI1 651 aa13.64□□□□□ -0.23
MRPL55-220ENST00000411464 DNAJC27Q9NZQ0 273 aa13.64□□□□□ -0.23
MRPL55-220ENST00000411464 TMEM210A6NLX4 147 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 ACAA1P09110 424 aaPredicted RBP13.63□□□□□ -0.23
MRPL55-220ENST00000411464 SLC25A1P53007 311 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 CAV3P56539 151 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 ZNF121P58317 390 aaPredicted RBP13.63□□□□□ -0.23
MRPL55-220ENST00000411464 GNGT1P63211 74 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 RASSF6Q6ZTQ3 369 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 PRSS45Q7RTY3 260 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 KLHDC1Q8N7A1 406 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 OR8D4Q8NGM9 314 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 ANGPTL6Q8NI99 470 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 C17orf50Q8WW18 174 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 PGAM5Q96HS1 289 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 RNF170Q96K19 258 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 NSMCE2Q96MF7 247 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 GAFA1Q96PS6 74 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 TSSK6Q9BXA6 273 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 NMNAT2Q9BZQ4 307 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 ABCB9Q9NP78 766 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 TBC1D23Q9NUY8 699 aa13.63□□□□□ -0.23
MRPL55-220ENST00000411464 OR2AT4A6NND4 320 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 ZNF850A8MQ14 1090 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 SIGLEC5O15389 551 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 AKR7A2O43488 359 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 ANGPTL7O43827 346 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 GASTP01350 101 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 IFNGP01579 166 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 TFF1P04155 84 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 VSIG10L2P0DP72 767 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 CLUP10909 449 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 GABRA2P47869 451 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 HMGA2P52926 109 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 PRDX4Q13162 271 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 LRRC75BQ2VPJ9 315 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 KLHL12Q53G59 568 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 TIGD4Q8IY51 512 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 OR9Q2Q8NGE9 314 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 RNF133Q8WVZ7 376 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 OR5P3Q8WZ94 311 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 RORBQ92753 470 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 BTBD10Q9BSF8 475 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 ABHD6Q9BV23 337 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 NPFFR1Q9GZQ6 430 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 RANBP3Q9H6Z4 567 aaPredicted RBP13.62□□□□□ -0.23
MRPL55-220ENST00000411464 ZNF319Q9P2F9 582 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 NLKQ9UBE8 527 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 BAIAP2Q9UQB8 552 aa13.62□□□□□ -0.23
MRPL55-220ENST00000411464 RIIAD1A6NNX1 92 aa13.61□□□□□ -0.23
MRPL55-220ENST00000411464 TNFRSF11BO00300 401 aa13.61□□□□□ -0.23
MRPL55-220ENST00000411464 XPNPEP2O43895 674 aa13.61□□□□□ -0.23
MRPL55-220ENST00000411464 HSD17B1P14061 328 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms