RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 SNRPBP14678 240 aaKnown RBP18.14■□□□□ 0.49
CPNE1-204ENST00000397443 P2RY14Q15391 338 aa18.14■□□□□ 0.49
CPNE1-204ENST00000397443 TMEM42Q69YG0 159 aa18.14■□□□□ 0.49
CPNE1-204ENST00000397443 SYNPRQ8TBG9 265 aa18.14■□□□□ 0.49
CPNE1-204ENST00000397443 NEUROG1Q92886 237 aa18.14■□□□□ 0.49
CPNE1-204ENST00000397443 PIK3IP1Q96FE7 263 aa18.14■□□□□ 0.49
CPNE1-204ENST00000397443 CA10Q9NS85 328 aa18.14■□□□□ 0.49
CPNE1-204ENST00000397443 MEGF11A6BM72 1044 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 AIPO00170 330 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 CD3EP07766 207 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 ERCC1P07992 297 aaPredicted RBP18.13■□□□□ 0.49
CPNE1-204ENST00000397443 ZNF93P35789 620 aaPredicted RBP18.13■□□□□ 0.49
CPNE1-204ENST00000397443 CNN3Q15417 329 aaKnown RBP18.13■□□□□ 0.49
CPNE1-204ENST00000397443 NKAIN3Q8N8D7 197 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 ZNF671Q8TAW3 534 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 AP3S1Q92572 193 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 SMURF1Q9HCE7 757 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 MYEF2Q9P2K5 600 aaKnown RBP18.13■□□□□ 0.49
CPNE1-204ENST00000397443 PLAUP00749 431 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 SELEP16581 610 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 THBS2P35442 1172 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 PSMD7P51665 324 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 RPS23P62266 143 aaKnown RBP18.13■□□□□ 0.49
CPNE1-204ENST00000397443 BEX5Q5H9J7 111 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 ZBTB37Q5TC79 503 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 MBNL2Q5VZF2 373 aaKnown RBP18.13■□□□□ 0.49
CPNE1-204ENST00000397443 ZDHHC23Q8IYP9 409 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 HS3ST6Q96QI5 342 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 TSC22D3Q99576 134 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 KCNK15Q9H427 330 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 CNTD2Q9H8S5 307 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 LIN7BQ9HAP6 207 aa18.13■□□□□ 0.49
CPNE1-204ENST00000397443 IQCF6A8MYZ5 107 aa18.12■□□□□ 0.49
CPNE1-204ENST00000397443 SHISA9B4DS77 424 aa18.12■□□□□ 0.49
CPNE1-204ENST00000397443 PLATP00750 562 aa18.12■□□□□ 0.49
CPNE1-204ENST00000397443 CST4P01036 141 aa18.12■□□□□ 0.49
CPNE1-204ENST00000397443 TUBG1P23258 451 aa18.12■□□□□ 0.49
CPNE1-204ENST00000397443 CROCCP3Q8IVE0 287 aa18.12■□□□□ 0.49
CPNE1-204ENST00000397443 DMRTC2Q8IXT2 367 aaPredicted RBP18.12■□□□□ 0.49
CPNE1-204ENST00000397443 C1orf174Q8IYL3 243 aa18.12■□□□□ 0.49
CPNE1-204ENST00000397443 BORCS8Q96FH0 119 aa18.12■□□□□ 0.49
CPNE1-204ENST00000397443 MMP27Q9H306 513 aa18.12■□□□□ 0.49
CPNE1-204ENST00000397443 MSL2Q9HCI7 577 aa18.12■□□□□ 0.49
CPNE1-204ENST00000397443 TUBG2Q9NRH3 451 aa18.12■□□□□ 0.49
CPNE1-204ENST00000397443 SLC7A11Q9UPY5 501 aa18.12■□□□□ 0.49
CPNE1-204ENST00000397443 IGHV3-64DA0A0J9YX35 117 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 GPM6AP51674 278 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 MTCP1P56278 107 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 KLF3P57682 345 aaPredicted RBP18.11■□□□□ 0.49
CPNE1-204ENST00000397443 KISS1Q15726 138 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 RAB11BQ15907 218 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 NUP37Q8NFH4 326 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 OR10AD1Q8NGE0 317 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 OR4D6Q8NGJ1 314 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 TBC1D15Q8TC07 691 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 HIST1H2AAQ96QV6 131 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 MRPL37Q9BZE1 423 aaKnown RBP18.11■□□□□ 0.49
CPNE1-204ENST00000397443 NXF2Q9GZY0 626 aaKnown RBP18.11■□□□□ 0.49
CPNE1-204ENST00000397443 METTL17Q9H7H0 456 aaPredicted RBP18.11■□□□□ 0.49
CPNE1-204ENST00000397443 MRPL15Q9P015 296 aaKnown RBP18.11■□□□□ 0.49
CPNE1-204ENST00000397443 CMAHPQ9Y471 501 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 ZNF250P15622 560 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 HTR2CP28335 458 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 OR3A4PP47883 348 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 SRSF1Q07955 248 aaKnown RBP eCLIP18.11■□□□□ 0.493e-6■□□□□ 9.1
CPNE1-204ENST00000397443 OR51D1Q8NGF3 324 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 OR5H6Q8NGV6 325 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 LGALS14Q8TCE9 139 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 HPSE2Q8WWQ2 592 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 SORCS2Q96PQ0 1159 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 STEAP1Q9UHE8 339 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 RNF115Q9Y4L5 304 aa18.11■□□□□ 0.49
CPNE1-204ENST00000397443 IGKV1-27A0A075B6S5 117 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 DEFB108AA8MXU0 73 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 H0YL77 283 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 SLC17A2O00624 439 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 KITLGP21583 273 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 PRKACBP22694 351 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 MMP15P51511 669 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 MADCAM1Q13477 382 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 LAX1Q8IWV1 398 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 OR8G5Q8NG78 346 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 OR8S1Q8NH09 359 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 GTF3AQ92664 365 aaKnown RBP18.1■□□□□ 0.49
CPNE1-204ENST00000397443 FGF23Q9GZV9 251 aaPredicted RBP18.1■□□□□ 0.49
CPNE1-204ENST00000397443 ABCB9Q9NP78 766 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 A0A075B6Q4 140 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 HPGDSO60760 199 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 OR4A8P0C604 315 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 PRF1P14222 555 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 ANGPTL5Q86XS5 388 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 SAMD12Q8N8I0 201 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 SPSB1Q96BD6 273 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 FOXRED1Q96CU9 486 aaPredicted RBP18.1■□□□□ 0.49
CPNE1-204ENST00000397443 ITPKCQ96DU7 683 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 RNF170Q96K19 258 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 ADAT1Q9BUB4 502 aaKnown RBP18.1■□□□□ 0.49
CPNE1-204ENST00000397443 TMEM100Q9NV29 134 aa18.1■□□□□ 0.49
CPNE1-204ENST00000397443 UTP20O75691 2785 aaKnown RBP18.09■□□□□ 0.49
CPNE1-204ENST00000397443 S100A5P33763 92 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms