RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 CST4P01036 141 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 CD37P11049 281 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 RAB3AP20336 220 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 PEX19P40855 299 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 RORCP51449 518 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 UBE2V2Q15819 145 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 DGUOKQ16854 277 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 CLVS2Q5SYC1 327 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 RGS7BPQ6MZT1 257 aaPredicted RBP14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 CDH24Q86UP0 819 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 DNAAF1Q8NEP3 725 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 TMEM171Q8WVE6 324 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 LIME1Q9H400 295 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 PPP1R3EQ9H7J1 279 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 RHBDD3Q9Y3P4 386 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 PLCE1Q9P212 2302 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 HIVEP1P15822 2718 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 MEGF11A6BM72 1044 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 NOTOA8MTQ0 251 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 DEFB108AA8MXU0 73 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 IQCF6A8MYZ5 107 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 ZNF250P15622 560 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 SELEP16581 610 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 ATF1P18846 271 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 KITLGP21583 273 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 LOXP28300 417 aaPredicted RBP14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 BDKRB2P30411 391 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 RPS23P62266 143 aaKnown RBP14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 ALKBH6Q3KRA9 238 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 BEX5Q5H9J7 111 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 SFXN4Q6P4A7 337 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 SLC22A25Q6T423 547 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 LYPD6Q86Y78 171 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 BHLHE23Q8NDY6 225 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 PIGTQ969N2 578 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 NXF2Q9GZY0 626 aaKnown RBP14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 TMEM138Q9NPI0 162 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 GPR173Q9NS66 373 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 PURGQ9UJV8 347 aaKnown RBP14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 V9GY05 133 aa14.49□□□□□ -0.09
TSPAN4-205ENST00000397406 ANXA2P2A6NMY6 339 aa14.48□□□□□ -0.09
TSPAN4-205ENST00000397406 SHISA9B4DS77 424 aa14.48□□□□□ -0.09
TSPAN4-205ENST00000397406 CTAG2O75638 210 aa14.48□□□□□ -0.09
TSPAN4-205ENST00000397406 NRASP01111 189 aa14.48□□□□□ -0.09
TSPAN4-205ENST00000397406 ALDOBP05062 364 aa14.48□□□□□ -0.09
TSPAN4-205ENST00000397406 CD3EP07766 207 aa14.48□□□□□ -0.09
TSPAN4-205ENST00000397406 GCH1P30793 250 aa14.48□□□□□ -0.09
TSPAN4-205ENST00000397406 SOX6P35712 828 aa14.48□□□□□ -0.09
TSPAN4-205ENST00000397406 KIR2DL3P43628 341 aa14.48□□□□□ -0.09
TSPAN4-205ENST00000397406 FABP6P51161 128 aa14.48□□□□□ -0.09
TSPAN4-205ENST00000397406 ADAM5Q6NVV9 412 aa14.48□□□□□ -0.09
TSPAN4-205ENST00000397406 NKAIN3Q8N8D7 197 aa14.48□□□□□ -0.09
TSPAN4-205ENST00000397406 OR52N4Q8NGI2 321 aa14.48□□□□□ -0.09
TSPAN4-205ENST00000397406 PIGCQ92535 297 aa14.48□□□□□ -0.09
TSPAN4-205ENST00000397406 GPR160Q9UJ42 338 aa14.48□□□□□ -0.09
TSPAN4-205ENST00000397406 FZR1Q9UM11 496 aa14.48□□□□□ -0.09
TSPAN4-205ENST00000397406 SPG11Q96JI7 2443 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 IFITM5A6NNB3 132 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 ZNF850A8MQ14 1090 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 ERCC1P07992 297 aaPredicted RBP14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 CFPP27918 469 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 THBS2P35442 1172 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 PSMD7P51665 324 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 PRDX4Q13162 271 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 ZNF404Q494X3 552 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 DMRTC1Q5HYR2 192 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 DDI2Q5TDH0 399 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 CRIP3Q6Q6R5 217 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 RNF144BQ7Z419 303 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 LRP11Q86VZ4 500 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 CROCCP3Q8IVE0 287 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 FTMTQ8N4E7 242 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 SYNPRQ8TBG9 265 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 PAPOLGQ9BWT3 736 aaKnown RBP14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 ZNF442Q9H7R0 627 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 CA10Q9NS85 328 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 MRPL15Q9P015 296 aaKnown RBP14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 ATP23Q9Y6H3 246 aa14.47□□□□□ -0.09
TSPAN4-205ENST00000397406 HRNRQ86YZ3 2850 aaPredicted RBP14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 F8P00451 2351 aa14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 IGLV3-9A0A075B6K5 115 aa14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 ANKRD30BLA7E2S9 258 aa14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 AIPO00170 330 aa14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 IGHV3-13P01766 116 aa14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 SLC2A2P11168 524 aaPredicted RBP14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 AZGP1P25311 298 aaKnown RBP14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 CNN3Q15417 329 aaKnown RBP14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 GLT8D1Q68CQ7 371 aa14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 VHLLQ6RSH7 139 aa14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 MOB3CQ70IA8 216 aa14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 CDH26Q8IXH8 852 aa14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 MCFD2Q8NI22 146 aa14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 NPRL2Q8WTW4 380 aa14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 FAM222BQ8WU58 562 aa14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 HPSE2Q8WWQ2 592 aa14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 SPSB1Q96BD6 273 aa14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 TECTBQ96PL2 329 aa14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 HS3ST6Q96QI5 342 aa14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 TMEM204Q9BSN7 226 aa14.46□□□□□ -0.09
TSPAN4-205ENST00000397406 CGGBP1Q9UFW8 167 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms