RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 PYCR1P32322 319 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 SAA4P35542 130 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 RPS27P42677 84 aaKnown RBP7.15□□□□□ -1.26
CAPN3-208ENST00000397204 EFNB2P52799 333 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 BLVRAP53004 296 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 PSME3P61289 254 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 IL5RAQ01344 420 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 EMX1Q04741 257 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-208ENST00000397204 SF3A3Q12874 501 aaKnown RBP eCLIP7.15□□□□□ -1.26
CAPN3-208ENST00000397204 IKZF1Q13422 519 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 BLMHQ13867 455 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 AANATQ16613 207 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 RPL13AP3Q6NVV1 102 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 DUX4L9Q6RFH8 374 aaPredicted RBP7.15□□□□□ -1.26
CAPN3-208ENST00000397204 Q6ZPA2 131 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 ZNF788Q6ZQV5 615 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 SLC16A9Q7RTY1 509 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 WDR86Q86TI4 376 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 ZDHHC21Q8IVQ6 265 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 FGFRL1Q8N441 504 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 LNX2Q8N448 690 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 FTMTQ8N4E7 242 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 FAM86B1Q8N7N1 296 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 CSNK2A3Q8NEV1 391 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 OR5T2Q8NGG2 359 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 OR52H1Q8NGJ2 320 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 OR5D13Q8NGL4 314 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 OR10Z1Q8NGY1 313 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 PPP1R35Q8TAP8 253 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 ZNRF4Q8WWF5 429 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 SLAMF6Q96DU3 332 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 MISP3Q96FF7 219 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 MICU1Q9BPX6 476 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 TLNRD1Q9H1K6 362 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 MEGF9Q9H1U4 602 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 FN3KQ9H479 309 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 TOR3AQ9H497 397 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 RAB18Q9NP72 206 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 ABCD2Q9UBJ2 740 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 DUX4Q9UBX2 424 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 MAB21L2Q9Y586 359 aa7.15□□□□□ -1.26
CAPN3-208ENST00000397204 A0A1W2PRD5 423 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 A0A1W2PRF3 423 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 A0A1W2PRM7 423 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 ZNF878C9JN71 531 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 PIN1P1O15428 100 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 XPNPEP2O43895 674 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 KRT36O76013 467 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 ACAA1P09110 424 aaPredicted RBP7.14□□□□□ -1.27
CAPN3-208ENST00000397204 SLC2A1P11166 492 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 GNALP38405 381 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 ENTPD1P49961 510 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 HMGA2P52926 109 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 CAV3P56539 151 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 GRB2P62993 217 aaKnown RBP7.14□□□□□ -1.27
CAPN3-208ENST00000397204 CSNK2BP67870 215 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 ELF3P78545 371 aaPredicted RBP7.14□□□□□ -1.27
CAPN3-208ENST00000397204 SPIBQ01892 262 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 FAM189A2Q15884 450 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 TIGD6Q17RP2 521 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 FAM76BQ5HYJ3 339 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 STUMQ69YW2 141 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 CPLX4Q7Z7G2 160 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 LINC00471Q8N535 108 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 FAM216BQ8N7L0 139 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 OR52L1Q8NGH7 329 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 OR4C13Q8NGP0 309 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 OR2T6Q8NHC8 308 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 ANGPTL6Q8NI99 470 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 H1FXQ92522 213 aaKnown RBP7.14□□□□□ -1.27
CAPN3-208ENST00000397204 MCUR1Q96AQ8 359 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 CMTM5Q96DZ9 223 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 SEH1LQ96EE3 360 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 DUS3LQ96G46 650 aaKnown RBP7.14□□□□□ -1.27
CAPN3-208ENST00000397204 REEP6Q96HR9 211 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 RAB3IPQ96QF0 476 aaPredicted RBP7.14□□□□□ -1.27
CAPN3-208ENST00000397204 SSX3Q99909 188 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 RANBP3Q9H6Z4 567 aaPredicted RBP7.14□□□□□ -1.27
CAPN3-208ENST00000397204 ABCB9Q9NP78 766 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 SPAG4Q9NPE6 437 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 IL1RAPQ9NPH3 570 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 IL20Q9NYY1 176 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 DNAJB11Q9UBS4 358 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 ZNF391Q9UJN7 358 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 RHBDD3Q9Y3P4 386 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 MPC1Q9Y5U8 109 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 COMMD3-BMI1R4GMX3 469 aa7.14□□□□□ -1.27
CAPN3-208ENST00000397204 DHRS12A0PJE2 317 aa7.13□□□□□ -1.27
CAPN3-208ENST00000397204 NKX6-3A6NJ46 265 aa7.13□□□□□ -1.27
CAPN3-208ENST00000397204 TMEM210A6NLX4 147 aa7.13□□□□□ -1.27
CAPN3-208ENST00000397204 ANXA2P2A6NMY6 339 aa7.13□□□□□ -1.27
CAPN3-208ENST00000397204 H3BUX3 64 aa7.13□□□□□ -1.27
CAPN3-208ENST00000397204 TBX1O43435 398 aa7.13□□□□□ -1.27
CAPN3-208ENST00000397204 SEMG1P04279 462 aa7.13□□□□□ -1.27
CAPN3-208ENST00000397204 ANXA2P07355 339 aaKnown RBP7.13□□□□□ -1.27
CAPN3-208ENST00000397204 SPARCP09486 303 aa7.13□□□□□ -1.27
CAPN3-208ENST00000397204 POU1F1P28069 291 aa7.13□□□□□ -1.27
CAPN3-208ENST00000397204 CX3CR1P49238 355 aa7.13□□□□□ -1.27
CAPN3-208ENST00000397204 NUDT2P50583 147 aa7.13□□□□□ -1.27
CAPN3-208ENST00000397204 SLC25A1P53007 311 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms