RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 SELENOFO60613 162 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 APOC1P02654 83 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 MSMBP08118 114 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 PSKH1P11801 424 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 SRP9P49458 86 aaKnown RBP12.31□□□□□ -0.44
SEC13-208ENST00000397109 LSM3P62310 102 aaKnown RBP12.31□□□□□ -0.44
SEC13-208ENST00000397109 EIF2B1Q14232 305 aaKnown RBP12.31□□□□□ -0.44
SEC13-208ENST00000397109 CR1LQ2VPA4 569 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 ZNF404Q494X3 552 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 CD200R1LQ6Q8B3 271 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 ZNF322Q6U7Q0 402 aaPredicted RBP12.31□□□□□ -0.44
SEC13-208ENST00000397109 RHOUQ7L0Q8 258 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 MRPL21Q7Z2W9 205 aaKnown RBP12.31□□□□□ -0.44
SEC13-208ENST00000397109 DPY19L4Q7Z388 723 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 ZNF283Q8N7M2 679 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 ZNF454Q8N9F8 522 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 OR51F2Q8NH61 342 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 NDNFQ8TB73 568 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 ITLN1Q8WWA0 313 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 RPL3LQ92901 407 aaKnown RBP12.31□□□□□ -0.44
SEC13-208ENST00000397109 OR2V2Q96R30 315 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 MNTQ99583 582 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 ZNF665Q9H7R5 613 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 SP140LQ9H930 580 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 TMEM106BQ9NUM4 274 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 PPP1R3CQ9UQK1 317 aa12.31□□□□□ -0.44
SEC13-208ENST00000397109 ZNF670-ZNF695F2Z2N8 137 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 HLA-DPB1P04440 258 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 CD1AP06126 327 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 SRD5A1P18405 259 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 PRKXP51817 358 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 ACTA2P62736 377 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 ACTG2P63267 376 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 ZNF846Q147U1 533 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 SPRNQ5BIV9 151 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 LHFPL3Q86UP9 236 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 SYS1Q8N2H4 156 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 BHLHE23Q8NDY6 225 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 OTOSQ8NHW6 89 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 SPRYD4Q8WW59 207 aaPredicted RBP12.3□□□□□ -0.44
SEC13-208ENST00000397109 GATAD2BQ8WXI9 593 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 MEGF10Q96KG7 1140 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 GAL3ST1Q99999 423 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 CHCHD6Q9BRQ6 235 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 ABHD6Q9BV23 337 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 SLC22A4Q9H015 551 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 OPA3Q9H6K4 179 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 SF3B6Q9Y3B4 125 aaKnown RBP12.3□□□□□ -0.44
SEC13-208ENST00000397109 NPTNQ9Y639 398 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 ATRQ13535 2644 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 WNK2Q9Y3S1 2297 aa12.3□□□□□ -0.44
SEC13-208ENST00000397109 A0A075B6Q4 140 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 TRAV20A0A0B4J274 112 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 LOC100506127A0A0U1RQW1 187 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 A0A1B0GWJ7 208 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 TRDV1A0A1B0GX56 115 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 ISPDA4D126 451 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 KIAA1324LA8MWY0 1029 aaPredicted RBP12.29□□□□□ -0.44
SEC13-208ENST00000397109 FAM157AC9JC47 383 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 GPX5O75715 221 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 IL1AP01583 271 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 IGHV2-5P01817 119 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 ALOX5APP20292 161 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 HSD11B1P28845 292 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 NAA10P41227 235 aaPredicted RBP12.29□□□□□ -0.44
SEC13-208ENST00000397109 MRPL28Q13084 256 aaKnown RBP12.29□□□□□ -0.44
SEC13-208ENST00000397109 OR2G6Q5TZ20 316 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 LIPKQ5VXJ0 399 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 KCTD20Q7Z5Y7 419 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 OR6Q1Q8NGQ2 317 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 RNF133Q8WVZ7 376 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 TMEM186Q96B77 213 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 CENPOQ9BU64 300 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 ALG8Q9BVK2 526 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 REPIN1Q9BWE0 567 aaKnown RBP12.29□□□□□ -0.44
SEC13-208ENST00000397109 TRIM36Q9NQ86 728 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 TMEM14AQ9Y6G1 99 aa12.29□□□□□ -0.44
SEC13-208ENST00000397109 GGT3PA6NGU5 568 aa12.28□□□□□ -0.44
SEC13-208ENST00000397109 METTL15A6NJ78 407 aa12.28□□□□□ -0.44
SEC13-208ENST00000397109 CD300LBA8K4G0 201 aa12.28□□□□□ -0.44
SEC13-208ENST00000397109 XRCC2O43543 280 aa12.28□□□□□ -0.44
SEC13-208ENST00000397109 THBS2P35442 1172 aa12.28□□□□□ -0.44
SEC13-208ENST00000397109 BMXP51813 675 aa12.28□□□□□ -0.44
SEC13-208ENST00000397109 ZNF92Q03936 586 aa12.28□□□□□ -0.44
SEC13-208ENST00000397109 SNAI3Q3KNW1 292 aa12.28□□□□□ -0.44
SEC13-208ENST00000397109 CELF2-AS1Q8N7Q2 184 aa12.28□□□□□ -0.44
SEC13-208ENST00000397109 OR10AD1Q8NGE0 317 aa12.28□□□□□ -0.44
SEC13-208ENST00000397109 MCFD2Q8NI22 146 aa12.28□□□□□ -0.44
SEC13-208ENST00000397109 KCTD7Q96MP8 289 aa12.28□□□□□ -0.44
SEC13-208ENST00000397109 GCM1Q9NP62 436 aa12.28□□□□□ -0.44
SEC13-208ENST00000397109 HIF1ANQ9NWT6 349 aa12.28□□□□□ -0.44
SEC13-208ENST00000397109 PEX16Q9Y5Y5 336 aa12.28□□□□□ -0.44
SEC13-208ENST00000397109 TMEM178BH3BS89 294 aa12.27□□□□□ -0.44
SEC13-208ENST00000397109 MLNRO43193 412 aa12.27□□□□□ -0.44
SEC13-208ENST00000397109 PLPP2O43688 288 aa12.27□□□□□ -0.44
SEC13-208ENST00000397109 IGHV2-70P01814 119 aa12.27□□□□□ -0.44
SEC13-208ENST00000397109 MRPL3P09001 348 aaKnown RBP12.27□□□□□ -0.44
SEC13-208ENST00000397109 H2BFMP0C1H6 154 aa12.27□□□□□ -0.44
SEC13-208ENST00000397109 DDOSTP39656 456 aa12.27□□□□□ -0.44
SEC13-208ENST00000397109 CX3CR1P49238 355 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms