RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 H3BMQ9 156 aa13.52□□□□□ -0.25
TMEM53-204ENST00000372243 ATF1P18846 271 aa13.52□□□□□ -0.25
TMEM53-204ENST00000372243 CA6P23280 308 aa13.52□□□□□ -0.25
TMEM53-204ENST00000372243 ZDHHC23Q8IYP9 409 aa13.52□□□□□ -0.25
TMEM53-204ENST00000372243 FBXL14Q8N1E6 418 aa13.52□□□□□ -0.25
TMEM53-204ENST00000372243 MUC15Q8N387 334 aa13.52□□□□□ -0.25
TMEM53-204ENST00000372243 ZNF611Q8N823 705 aa13.52□□□□□ -0.25
TMEM53-204ENST00000372243 OR13C9Q8NGT0 318 aa13.52□□□□□ -0.25
TMEM53-204ENST00000372243 SPSB1Q96BD6 273 aa13.52□□□□□ -0.25
TMEM53-204ENST00000372243 C12orf43Q96C57 262 aaKnown RBP13.52□□□□□ -0.25
TMEM53-204ENST00000372243 C14orf79Q96F83 325 aa13.52□□□□□ -0.25
TMEM53-204ENST00000372243 TMEM138Q9NPI0 162 aa13.52□□□□□ -0.25
TMEM53-204ENST00000372243 PLEKHB1Q9UF11 243 aaPredicted RBP13.52□□□□□ -0.25
TMEM53-204ENST00000372243 USP9YO00507 2555 aaPredicted RBP13.51□□□□□ -0.25
TMEM53-204ENST00000372243 SPTAN1Q13813 2472 aaKnown RBP13.51□□□□□ -0.25
TMEM53-204ENST00000372243 IGKV1-9A0A0C4DH69 117 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 SHISA3A0PJX4 238 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 ANXA2P2A6NMY6 339 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 ALDOBP05062 364 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 ERCC1P07992 297 aaPredicted RBP13.51□□□□□ -0.25
TMEM53-204ENST00000372243 ADH4P08319 380 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 PRKACBP22694 351 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 NKPD1Q17RQ9 610 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 SWI5Q1ZZU3 235 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 MST1LQ2TV78 715 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 CEACAM21Q3KPI0 293 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 Q6ZR03 302 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 USP43Q70EL4 1123 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 MOB3CQ70IA8 216 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 LRRTM1Q86UE6 522 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 CDH26Q8IXH8 852 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 NKAIN3Q8N8D7 197 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 SPERTQ8NA61 448 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 DNAAF1Q8NEP3 725 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 OR5A2Q8NGI9 324 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 ITPKCQ96DU7 683 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 HIST1H2AAQ96QV6 131 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 GPR173Q9NS66 373 aa13.51□□□□□ -0.25
TMEM53-204ENST00000372243 RAI1Q7Z5J4 1906 aaPredicted RBP13.51□□□□□ -0.25
TMEM53-204ENST00000372243 PDCD5O14737 125 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 IL1AP01583 271 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 DANCRP0C864 163 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 PRF1P14222 555 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 BDKRB2P30411 391 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 TGFBR1P36897 503 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 PSMD7P51665 324 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 FUT6P51993 359 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 FOXB2Q5VYV0 432 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 PLCXD3Q63HM9 321 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 OR51A2Q8NGJ7 313 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 OR5P3Q8WZ94 311 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 DIRC2Q96SL1 478 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 ADAT1Q9BUB4 502 aaKnown RBP13.5□□□□□ -0.25
TMEM53-204ENST00000372243 CLEC4MQ9H2X3 399 aaPredicted RBP13.5□□□□□ -0.25
TMEM53-204ENST00000372243 PPP1R3EQ9H7J1 279 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 ZDHHC8Q9ULC8 765 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 SLC7A11Q9UPY5 501 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 ICE1Q9Y2F5 2266 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 ABCA4P78363 2273 aa13.5□□□□□ -0.25
TMEM53-204ENST00000372243 GCN1Q92616 2671 aaKnown RBP13.5□□□□□ -0.25
TMEM53-204ENST00000372243 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.49□□□□□ -0.25
TMEM53-204ENST00000372243 TRIM64BA6NI03 449 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 OR5B21A6NL26 309 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 M0R233 179 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 MAGEB3O15480 346 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 MLNRO43193 412 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 CDRT1O95170 752 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 MAS1P04201 325 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 CD37P11049 281 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 ADRA2CP18825 462 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 RAB3BP20337 219 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 AZGP1P25311 298 aaKnown RBP13.49□□□□□ -0.25
TMEM53-204ENST00000372243 SDC2P34741 201 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 ZNF81P51508 661 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 OR8G1Q15617 311 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 CEP78Q5JTW2 689 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 AGAP6Q5VW22 663 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 DTX2Q86UW9 622 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 HPSE2Q8WWQ2 592 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 MS4A5Q9H3V2 200 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 MSL2Q9HCI7 577 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 CBLN4Q9NTU7 201 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 UTP20O75691 2785 aaKnown RBP13.49□□□□□ -0.25
TMEM53-204ENST00000372243 PKDREJQ9NTG1 2253 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 HRNRQ86YZ3 2850 aaPredicted RBP13.49□□□□□ -0.25
TMEM53-204ENST00000372243 ZSCAN5BA6NJL1 495 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 OCMP0CE72 109 aaPredicted RBP13.49□□□□□ -0.25
TMEM53-204ENST00000372243 ALDH3B1P43353 468 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 SERPINB10P48595 397 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 SNRPD2P62316 118 aaKnown RBP13.49□□□□□ -0.25
TMEM53-204ENST00000372243 MZT1Q08AG7 82 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 LHFPL2Q6ZUX7 228 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 LYPD6Q86Y78 171 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 ZNF295-AS1Q8N0V1 137 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 OR8S1Q8NH09 359 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 FOXRED1Q96CU9 486 aaPredicted RBP13.49□□□□□ -0.25
TMEM53-204ENST00000372243 BORCS8Q96FH0 119 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 CPNE2Q96FN4 548 aaPredicted RBP13.49□□□□□ -0.25
TMEM53-204ENST00000372243 MICU1Q9BPX6 476 aa13.49□□□□□ -0.25
TMEM53-204ENST00000372243 RTL8AQ9BWD3 113 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms