RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 SSX8Q7RTT4 187 aa20.53■□□□□ 0.88
SNX3-203ENST00000368979 RAB40AQ8WXH6 277 aa20.53■□□□□ 0.88
SNX3-203ENST00000368979 CCDC32Q9BV29 185 aa20.53■□□□□ 0.88
SNX3-203ENST00000368979 BCL2L14Q9BZR8 327 aa20.53■□□□□ 0.88
SNX3-203ENST00000368979 NEK6Q9HC98 313 aa20.53■□□□□ 0.88
SNX3-203ENST00000368979 TUBG2Q9NRH3 451 aa20.53■□□□□ 0.88
SNX3-203ENST00000368979 RHBDL2Q9NX52 303 aa20.53■□□□□ 0.88
SNX3-203ENST00000368979 COQ3Q9NZJ6 369 aa20.53■□□□□ 0.88
SNX3-203ENST00000368979 BPNT1O95861 308 aa20.52■□□□□ 0.87
SNX3-203ENST00000368979 OR3A4PP47883 348 aa20.52■□□□□ 0.87
SNX3-203ENST00000368979 ART1P52961 327 aa20.52■□□□□ 0.87
SNX3-203ENST00000368979 MADCAM1Q13477 382 aa20.52■□□□□ 0.87
SNX3-203ENST00000368979 IL18Q14116 193 aa20.52■□□□□ 0.87
SNX3-203ENST00000368979 SNX29P2Q8IUI4 249 aa20.52■□□□□ 0.87
SNX3-203ENST00000368979 C1orf174Q8IYL3 243 aa20.52■□□□□ 0.87
SNX3-203ENST00000368979 FTMTQ8N4E7 242 aa20.52■□□□□ 0.87
SNX3-203ENST00000368979 HAVCR1Q96D42 359 aa20.52■□□□□ 0.87
SNX3-203ENST00000368979 CMBLQ96DG6 245 aa20.52■□□□□ 0.87
SNX3-203ENST00000368979 PAPOLGQ9BWT3 736 aaKnown RBP20.52■□□□□ 0.87
SNX3-203ENST00000368979 GPR160Q9UJ42 338 aa20.52■□□□□ 0.87
SNX3-203ENST00000368979 MRPS28Q9Y2Q9 187 aaKnown RBP20.52■□□□□ 0.87
SNX3-203ENST00000368979 POLEQ07864 2286 aa20.51■□□□□ 0.87
SNX3-203ENST00000368979 ZNF850A8MQ14 1090 aa20.51■□□□□ 0.87
SNX3-203ENST00000368979 UPK1BO75841 260 aa20.51■□□□□ 0.87
SNX3-203ENST00000368979 RAC2P15153 192 aa20.51■□□□□ 0.87
SNX3-203ENST00000368979 RANBP1P43487 201 aa20.51■□□□□ 0.87
SNX3-203ENST00000368979 EFNB2P52799 333 aa20.51■□□□□ 0.87
SNX3-203ENST00000368979 IFITM3Q01628 133 aa20.51■□□□□ 0.87
SNX3-203ENST00000368979 PLCXD3Q63HM9 321 aa20.51■□□□□ 0.87
SNX3-203ENST00000368979 AWAT2Q6E213 333 aa20.51■□□□□ 0.87
SNX3-203ENST00000368979 OR2T2Q6IF00 324 aa20.51■□□□□ 0.87
SNX3-203ENST00000368979 ALKBH2Q6NS38 261 aa20.51■□□□□ 0.87
SNX3-203ENST00000368979 MOB3CQ70IA8 216 aa20.51■□□□□ 0.87
SNX3-203ENST00000368979 ANGPTL5Q86XS5 388 aa20.51■□□□□ 0.87
SNX3-203ENST00000368979 GDPD1Q8N9F7 314 aa20.51■□□□□ 0.87
SNX3-203ENST00000368979 MARS2Q96GW9 593 aaKnown RBP20.51■□□□□ 0.87
SNX3-203ENST00000368979 GPER1Q99527 375 aa20.51■□□□□ 0.87
SNX3-203ENST00000368979 ZFYVE26Q68DK2 2539 aa20.5■□□□□ 0.87
SNX3-203ENST00000368979 A0A1B0GUH1 482 aa20.5■□□□□ 0.87
SNX3-203ENST00000368979 PPP3CBP16298 524 aa20.5■□□□□ 0.87
SNX3-203ENST00000368979 QRFPP83859 136 aa20.5■□□□□ 0.87
SNX3-203ENST00000368979 PRDX4Q13162 271 aa20.5■□□□□ 0.87
SNX3-203ENST00000368979 LHFPL2Q6ZUX7 228 aa20.5■□□□□ 0.87
SNX3-203ENST00000368979 PNLDC1Q8NA58 520 aaKnown RBP20.5■□□□□ 0.87
SNX3-203ENST00000368979 GALNT11Q8NCW6 608 aa20.5■□□□□ 0.87
SNX3-203ENST00000368979 PTX4Q96A99 478 aa20.5■□□□□ 0.87
SNX3-203ENST00000368979 C1orf147Q96MC9 270 aaPredicted RBP20.5■□□□□ 0.87
SNX3-203ENST00000368979 SLC7A11Q9UPY5 501 aa20.5■□□□□ 0.87
SNX3-203ENST00000368979 NBEAQ8NFP9 2946 aa20.5■□□□□ 0.87
SNX3-203ENST00000368979 IGKV1-27A0A075B6S5 117 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 A0A0G2JMP0 313 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 A0A0X1KG70 313 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 THBDP07204 575 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 ALDH3B1P43353 468 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 NR4A2P43354 598 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 PITPNBP48739 271 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 FUT6P51993 359 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 ZP1P60852 638 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 GLIPR1L1Q6UWM5 242 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 BAIAP2L2Q6UXY1 529 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 ZDHHC23Q8IYP9 409 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 DTX3Q8N9I9 347 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 OR4M2Q8NGB6 313 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 LILRB4Q8NHJ6 448 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 KLF14Q8TD94 323 aaPredicted RBP20.49■□□□□ 0.87
SNX3-203ENST00000368979 RFT1Q96AA3 541 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 BORCS8Q96FH0 119 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 CPNE2Q96FN4 548 aaPredicted RBP20.49■□□□□ 0.87
SNX3-203ENST00000368979 FBLN5Q9UBX5 448 aa20.49■□□□□ 0.87
SNX3-203ENST00000368979 RP1L1Q8IWN7 2480 aaPredicted RBP20.49■□□□□ 0.87
SNX3-203ENST00000368979 FAM230AA0A1W2PPH8 454 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 FAM90A27PA6NNH2 459 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 ANKRD30BLA7E2S9 258 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 LILRA1O75019 489 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 CRYAAP02489 173 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 VSIG8P0DPA2 414 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 NAT2P11245 290 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 RAB6AP20340 208 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 RBP2P50120 134 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 ZNF181Q2M3W8 571 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 PYDC2Q56P42 97 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 BIVMQ86UB2 503 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 BHLHE23Q8NDY6 225 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 HPSE2Q8WWQ2 592 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 S100A16Q96FQ6 103 aaKnown RBP20.48■□□□□ 0.87
SNX3-203ENST00000368979 MRPL15Q9P015 296 aaKnown RBP20.48■□□□□ 0.87
SNX3-203ENST00000368979 TMEM14DPA8MWL7 114 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 IQCF6A8MYZ5 107 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 CTAG2O75638 210 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 UBBP0CG47 229 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 SELEP16581 610 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 MPV17P39210 176 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 PTGFRP43088 359 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 MTCP1P56278 107 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 PSG7Q13046 419 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 UNC119Q13432 240 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 CEACAM21Q3KPI0 293 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 TMEM255AQ5JRV8 349 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 OR10K2Q6IF99 312 aa20.48■□□□□ 0.87
SNX3-203ENST00000368979 PYHIN1Q6K0P9 492 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms