RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 CTRB2Q6GPI1 263 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 PEG10Q86TG7 708 aaKnown RBP7.55□□□□□ -1.2
RFX3-202ENST00000358730 FAM219AQ8IW50 185 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 GTPBP8Q8N3Z3 284 aaPredicted RBP7.55□□□□□ -1.2
RFX3-202ENST00000358730 MARC2Q969Z3 335 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 SCGB3A2Q96PL1 93 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 CDC6Q99741 560 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 RAB18Q9NP72 206 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 OCIAD1Q9NX40 245 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 SLC39A1Q9NY26 324 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 TRBV6-7A0A0A0MS04 114 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 LOC102725191A0A1B0GVB3 256 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 OR5H15A6NDH6 313 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 CEACAM18A8MTB9 384 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 K7ESF4 209 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 TOR1AO14656 332 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 GDF9O60383 454 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 DHRS3O75911 302 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 PRF1P14222 555 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 THBS4P35443 961 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 AKR1C2P52895 323 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 LSM6P62312 80 aaKnown RBP7.55□□□□□ -1.2
RFX3-202ENST00000358730 AKR1C1Q04828 323 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 AIMP2Q13155 320 aaKnown RBP7.55□□□□□ -1.2
RFX3-202ENST00000358730 ANKRD55Q3KP44 614 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 PHYHD1Q5SRE7 291 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 BHLHE23Q8NDY6 225 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 GJC3Q8NFK1 279 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 PAQR8Q8TEZ7 354 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 PIGTQ969N2 578 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 ZNF385AQ96PM9 386 aaKnown RBP7.55□□□□□ -1.2
RFX3-202ENST00000358730 S100A13Q99584 98 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 RTBDNQ9BSG5 229 aaPredicted RBP7.55□□□□□ -1.2
RFX3-202ENST00000358730 RNF126Q9BV68 326 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 NKX6-2Q9C056 277 aaPredicted RBP7.55□□□□□ -1.2
RFX3-202ENST00000358730 SLC26A1Q9H2B4 701 aa7.55□□□□□ -1.2
RFX3-202ENST00000358730 METTL8Q9H825 291 aaKnown RBP7.55□□□□□ -1.2
RFX3-202ENST00000358730 ZNF701Q9NV72 531 aaPredicted RBP7.55□□□□□ -1.2
RFX3-202ENST00000358730 MSGN1A6NI15 193 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 FAM74A7A6NL05 159 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 NPIPA2E9PIF3 369 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 F8VVB4 439 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 F8VWA3 439 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 NPIPA3F8WFD2 350 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 G3V3Y1 287 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 DNASE2O00115 360 aaPredicted RBP7.54□□□□□ -1.2
RFX3-202ENST00000358730 FKBP2P26885 142 aaKnown RBP7.54□□□□□ -1.2
RFX3-202ENST00000358730 ENDOGQ14249 297 aaKnown RBP7.54□□□□□ -1.2
RFX3-202ENST00000358730 PCOLCEQ15113 449 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 UBE2V2Q15819 145 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 FAM74A3Q4VXF1 159 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 AADACL3Q5VUY0 350 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 LYSMD4Q5XG99 296 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 MRPL14Q6P1L8 145 aaKnown RBP7.54□□□□□ -1.2
RFX3-202ENST00000358730 FAM122CQ6P4D5 195 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 UQCC3Q6UW78 93 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 Q7L0L9 218 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 LHFPL1Q86WI0 220 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 BAP18Q8IXM2 172 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 FAM89BQ8N5H3 189 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 TMED6Q8WW62 240 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 JSRP1Q96MG2 331 aaPredicted RBP7.54□□□□□ -1.2
RFX3-202ENST00000358730 UCN2Q96RP3 112 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 OR5AC2Q9NZP5 309 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 GHRLQ9UBU3 117 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 PIGLQ9Y2B2 252 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 SDK2Q58EX2 2172 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 TSPAN9O75954 239 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 ONECUT2O95948 504 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 IGLV3-1P01715 115 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 FCGR2AP12318 317 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 GLRA1P23415 457 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 H3F3AP84243 136 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 CHRFAM7AQ494W8 412 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 NKAPLQ5M9Q1 402 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 PRSS54Q6PEW0 395 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 CRIP3Q6Q6R5 217 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 GALNTL5Q7Z4T8 443 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 DTX1Q86Y01 620 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 SLC30A7Q8NEW0 376 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 GNRHR2Q96P88 292 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 TSNAXQ99598 290 aaKnown RBP7.54□□□□□ -1.2
RFX3-202ENST00000358730 RBM24Q9BX46 236 aaKnown RBP7.54□□□□□ -1.2
RFX3-202ENST00000358730 PECRQ9BY49 303 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 CHST5Q9GZS9 411 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 SLC6A15Q9H2J7 730 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 OSGIN2Q9Y236 505 aa7.54□□□□□ -1.2
RFX3-202ENST00000358730 VPS13AQ96RL7 3174 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 A0A087WZY1 265 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 A0A0U1RQV5 110 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 RAB19A4D1S5 217 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 FOXI3A8MTJ6 420 aaPredicted RBP7.53□□□□□ -1.2
RFX3-202ENST00000358730 SERPINE3A8MV23 424 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 M0R135 149 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 KNG1P01042 644 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 DBHP09172 617 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 CCL3P10147 92 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 CPT2P23786 658 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 CTSSP25774 331 aa7.53□□□□□ -1.2
RFX3-202ENST00000358730 S100A10P60903 97 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms