RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 TCN2P20062 427 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PRKACBP22694 351 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FPR2P25090 351 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 MPLP40238 635 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 BAMBIQ13145 260 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 UBE2V2Q15819 145 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TMEM128Q5BJH2 165 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 GSG1LQ6UXU4 331 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 COMMD2Q86X83 199 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CCDC28AQ8IWP9 274 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 GVQW1Q8N7I0 195 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR1F12Q8NHA8 337 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 MRPS24Q96EL2 167 aaKnown RBP9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PHYHIPLQ96FC7 376 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 IP6K3Q96PC2 410 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CDC6Q99741 560 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 DHRS9Q9BPW9 319 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 P4HTMQ9NXG6 502 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 EDARQ9UNE0 448 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TNFSF18Q9UNG2 199 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TECTAO75443 2155 aa9.38□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR5H15A6NDH6 313 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR2AT4A6NND4 320 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 IFNA6P05013 189 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 UBA52P62987 128 aaKnown RBP9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CNN3Q15417 329 aaKnown RBP9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 C11orf87Q6NUJ2 197 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 RAB11FIP2Q7L804 512 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 KMT2EQ8IZD2 1858 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TMEM105Q8N8V8 129 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SEMA6DQ8NFY4 1073 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR14L1PQ8NHC6 308 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SPSB4Q96A44 273 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SGK3Q96BR1 496 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 RBM24Q9BX46 236 aaKnown RBP9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 NMES1Q9C002 83 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PLEK2Q9NYT0 353 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR5H14A6NHG9 310 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CYCSP99999 105 aaKnown RBP9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PPP1R1AQ13522 171 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 MICBQ29980 383 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 HYAL4Q2M3T9 481 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SCGB2B2Q4G0G5 96 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TOR2AQ5JU69 321 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 C11orf88Q6PI97 169 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TMEM17Q86X19 198 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 NKD1Q969G9 470 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 WDR89Q96FK6 387 aaPredicted RBP9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 Q96M66 194 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FAM173AQ9BQD7 235 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FN3KRPQ9HA64 309 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OSGIN2Q9Y236 505 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TIMM10BQ9Y5J6 103 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 NCKAP5O14513 1909 aa9.37□□□□□ -0.91
TRAF3IP2-201ENST00000340026 MYO15AQ9UKN7 3530 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ARPC5O15511 151 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 COX5BP10606 129 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 LYL1P12980 280 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CLDN15P56746 228 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 RGS7BPQ6MZT1 257 aaPredicted RBP9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 RNF144BQ7Z419 303 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 TMED4Q7Z7H5 227 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR5M9Q8NGP3 310 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR10D3Q8NH80 312 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ADAMTS17Q8TE56 1095 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 ARHGAP5-AS1Q96IT6 56 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CITED4Q96RK1 184 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PRDM14Q9GZV8 571 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 MFFQ9GZY8 342 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 IGHV3-15A0A0B4J1V0 119 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 A0A0G2JMM0 328 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 A0A1W2PPB8 328 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 A0A1W2PRS3 328 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 KIR3DP1A8MWS1 328 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 C9orf172C9J069 976 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 F5H5K5 113 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CRTAPO75718 401 aaPredicted RBP9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 RAD51DO75771 328 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SIX6O95475 246 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PDGFAP04085 211 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SP9P0CG40 484 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OTX2P32243 289 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 IL13RA1P78552 427 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CAMK2BQ13554 666 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR8B8Q15620 311 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 OR52W1Q6IF63 320 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 COLCA1Q6ZS62 124 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 LHFPL2Q6ZUX7 228 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 AAED1Q7RTV5 226 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 CD163Q86VB7 1156 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 COMMD7Q86VX2 200 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 Q8NFD4 153 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PXT1Q8NFP0 134 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 JSRP1Q96MG2 331 aaPredicted RBP9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 GPER1Q99527 375 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 FOXB1Q99853 325 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 PECRQ9BY49 303 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 DNTTIP1Q9H147 329 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 SLC25A32Q9H2D1 315 aa9.36□□□□□ -0.91
TRAF3IP2-201ENST00000340026 RAB18Q9NP72 206 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms