RNA–Protein interactions for RNA: ENST00000339394.6

SDC3-202, Transcript of syndecan 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC3, Length 1,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-202ENST00000339394 ANXA2P2A6NMY6 339 aa18.82■□□□□ 0.6
SDC3-202ENST00000339394 ZNF879B4DU55 563 aa18.82■□□□□ 0.6
SDC3-202ENST00000339394 NDUFS7O75251 213 aa18.82■□□□□ 0.6
SDC3-202ENST00000339394 SC5DO75845 299 aa18.82■□□□□ 0.6
SDC3-202ENST00000339394 SERPINA3P01011 423 aa18.82■□□□□ 0.6
SDC3-202ENST00000339394 TNFAIP6P98066 277 aaPredicted RBP18.82■□□□□ 0.6
SDC3-202ENST00000339394 MAB21L1Q13394 359 aa18.82■□□□□ 0.6
SDC3-202ENST00000339394 UBE2V2Q15819 145 aa18.82■□□□□ 0.6
SDC3-202ENST00000339394 ACSM3Q53FZ2 586 aa18.82■□□□□ 0.6
SDC3-202ENST00000339394 MOB3CQ70IA8 216 aa18.82■□□□□ 0.6
SDC3-202ENST00000339394 OR8S1Q8NH09 359 aa18.82■□□□□ 0.6
SDC3-202ENST00000339394 OR2V2Q96R30 315 aa18.82■□□□□ 0.6
SDC3-202ENST00000339394 IL19Q9UHD0 177 aa18.82■□□□□ 0.6
SDC3-202ENST00000339394 VPS13CQ709C8 3753 aa18.82■□□□□ 0.6
SDC3-202ENST00000339394 CACNA1DQ01668 2161 aa18.82■□□□□ 0.6
SDC3-202ENST00000339394 A0A1W2PPK0 400 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 NCR1O76036 304 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 ERCC1P07992 297 aaPredicted RBP18.81■□□□□ 0.6
SDC3-202ENST00000339394 CD55P08174 381 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 TNFSF4P23510 183 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 PSMA1P25786 263 aaKnown RBP18.81■□□□□ 0.6
SDC3-202ENST00000339394 TRAM1Q15629 374 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 SPRNQ5BIV9 151 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 SPERTQ8NA61 448 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 OR5D14Q8NGL3 314 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 HPSE2Q8WWQ2 592 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 OR5P3Q8WZ94 311 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 HIST1H2AAQ96QV6 131 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 DECR2Q9NUI1 292 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 ARFGEF3Q5TH69 2177 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 HPXP02790 462 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 PAX1P15863 534 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 CEACAM21Q3KPI0 293 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 PLCXD3Q63HM9 321 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 ASPHD2Q6ICH7 369 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 UNQ9370/PRO34162Q6UXP9 181 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 TMEM91Q6ZNR0 172 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 UTS2BQ765I0 119 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 NINJ1Q92982 152 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 ORAI1Q96D31 301 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 TRMT61AQ96FX7 289 aaKnown RBP18.81■□□□□ 0.6
SDC3-202ENST00000339394 DERL3Q96Q80 235 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 SAP30LQ9HAJ7 183 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 ABCB9Q9NP78 766 aa18.81■□□□□ 0.6
SDC3-202ENST00000339394 NAV2Q8IVL1 2488 aa18.8■□□□□ 0.6
SDC3-202ENST00000339394 TRBV5-7A0A0A0MS05 114 aa18.8■□□□□ 0.6
SDC3-202ENST00000339394 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.8■□□□□ 0.6
SDC3-202ENST00000339394 IGHV3-64DA0A0J9YX35 117 aa18.8■□□□□ 0.6
SDC3-202ENST00000339394 LOC100289279A0A1B0GTE1 492 aa18.8■□□□□ 0.6
SDC3-202ENST00000339394 TPD52L2O43399 206 aaKnown RBP18.8■□□□□ 0.6
SDC3-202ENST00000339394 GATBO75879 557 aaKnown RBP18.8■□□□□ 0.6
SDC3-202ENST00000339394 F12P00748 615 aaPredicted RBP18.8■□□□□ 0.6
SDC3-202ENST00000339394 TFAP2AP05549 437 aa18.8■□□□□ 0.6
SDC3-202ENST00000339394 FABP5Q01469 135 aa18.8■□□□□ 0.6
SDC3-202ENST00000339394 CEACAM19Q7Z692 300 aa18.8■□□□□ 0.6
SDC3-202ENST00000339394 NEU4Q8WWR8 484 aaPredicted RBP18.8■□□□□ 0.6
SDC3-202ENST00000339394 MEGF10Q96KG7 1140 aa18.8■□□□□ 0.6
SDC3-202ENST00000339394 EGLN1Q9GZT9 426 aa18.8■□□□□ 0.6
SDC3-202ENST00000339394 FGF23Q9GZV9 251 aaPredicted RBP18.8■□□□□ 0.6
SDC3-202ENST00000339394 CXXC4Q9H2H0 198 aa18.8■□□□□ 0.6
SDC3-202ENST00000339394 ZCCHC4Q9H5U6 513 aa18.8■□□□□ 0.6
SDC3-202ENST00000339394 USF3Q68DE3 2245 aa18.8■□□□□ 0.6
SDC3-202ENST00000339394 IGKV1-9A0A0C4DH69 117 aa18.79■□□□□ 0.6
SDC3-202ENST00000339394 PIN1P1O15428 100 aa18.79■□□□□ 0.6
SDC3-202ENST00000339394 LY6HO94772 140 aa18.79■□□□□ 0.6
SDC3-202ENST00000339394 MAPK3P27361 379 aaPredicted RBP18.79■□□□□ 0.6
SDC3-202ENST00000339394 THBS2P35442 1172 aa18.79■□□□□ 0.6
SDC3-202ENST00000339394 CD200P41217 278 aa18.79■□□□□ 0.6
SDC3-202ENST00000339394 EFNA4P52798 201 aa18.79■□□□□ 0.6
SDC3-202ENST00000339394 DEFB113Q30KQ7 82 aa18.79■□□□□ 0.6
SDC3-202ENST00000339394 CDH24Q86UP0 819 aa18.79■□□□□ 0.6
SDC3-202ENST00000339394 OR5A2Q8NGI9 324 aa18.79■□□□□ 0.6
SDC3-202ENST00000339394 OR13C9Q8NGT0 318 aa18.79■□□□□ 0.6
SDC3-202ENST00000339394 ITLN1Q8WWA0 313 aa18.79■□□□□ 0.6
SDC3-202ENST00000339394 THRSPQ92748 146 aa18.79■□□□□ 0.6
SDC3-202ENST00000339394 RNF170Q96K19 258 aa18.79■□□□□ 0.6
SDC3-202ENST00000339394 MICU1Q9BPX6 476 aa18.79■□□□□ 0.6
SDC3-202ENST00000339394 NOX4Q9NPH5 578 aa18.79■□□□□ 0.6
SDC3-202ENST00000339394 BEX4Q9NWD9 120 aaPredicted RBP18.79■□□□□ 0.6
SDC3-202ENST00000339394 TAS2R4Q9NYW5 299 aa18.79■□□□□ 0.6
SDC3-202ENST00000339394 RGS9O75916 674 aaPredicted RBP18.78■□□□□ 0.6
SDC3-202ENST00000339394 IGHV4-39P01824 125 aa18.78■□□□□ 0.6
SDC3-202ENST00000339394 CD36P16671 472 aa18.78■□□□□ 0.6
SDC3-202ENST00000339394 TGFBR2P37173 567 aa18.78■□□□□ 0.6
SDC3-202ENST00000339394 PTH2RP49190 550 aa18.78■□□□□ 0.6
SDC3-202ENST00000339394 SRP9P49458 86 aaKnown RBP18.78■□□□□ 0.6
SDC3-202ENST00000339394 GPM6AP51674 278 aa18.78■□□□□ 0.6
SDC3-202ENST00000339394 TESK1Q15569 626 aa18.78■□□□□ 0.6
SDC3-202ENST00000339394 FAM27D1Q5T7N8 215 aa18.78■□□□□ 0.6
SDC3-202ENST00000339394 CD200R1LQ6Q8B3 271 aa18.78■□□□□ 0.6
SDC3-202ENST00000339394 CELF2-AS1Q8N7Q2 184 aa18.78■□□□□ 0.6
SDC3-202ENST00000339394 MBD6Q96DN6 1003 aa18.78■□□□□ 0.6
SDC3-202ENST00000339394 TECTBQ96PL2 329 aa18.78■□□□□ 0.6
SDC3-202ENST00000339394 RTL8AQ9BWD3 113 aa18.78■□□□□ 0.6
SDC3-202ENST00000339394 GSX2Q9BZM3 304 aa18.78■□□□□ 0.6
SDC3-202ENST00000339394 PPIL3Q9H2H8 161 aaKnown RBP18.78■□□□□ 0.6
SDC3-202ENST00000339394 C14orf119Q9NWQ9 140 aa18.78■□□□□ 0.6
SDC3-202ENST00000339394 PDZD2O15018 2839 aa18.78■□□□□ 0.6
SDC3-202ENST00000339394 ZNF732B4DXR9 585 aa18.77■□□□□ 0.6
SDC3-202ENST00000339394 GABRPO00591 440 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms