RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 GPM6AP51674 278 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 CYB5R2Q6BCY4 276 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 DLEU7Q6UYE1 221 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 HTR3DQ70Z44 454 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 LSMEM1Q8N8F7 131 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 C11orf40Q8WZ69 217 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 CDCA3Q99618 268 aaPredicted RBP7.16□□□□□ -1.26
CIITA-201ENST00000324288 UFC1Q9Y3C8 167 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 PTPRDP23468 1912 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 ALOX12BO75342 701 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 FAM219AQ8IW50 185 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 NAT8BQ9UHF3 227 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 SH2D1BO14796 132 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 TP53I13Q8NBR0 393 aaPredicted RBP7.15□□□□□ -1.26
CIITA-201ENST00000324288 GSX1Q9H4S2 264 aaPredicted RBP7.15□□□□□ -1.26
CIITA-201ENST00000324288 SLC25A22Q9H936 323 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 TIMM9Q9Y5J7 89 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 PMS2P1A4D2B8 440 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 MBTPS2O43462 519 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 NEURL1O76050 574 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 ACAA2P42765 397 aaKnown RBP7.15□□□□□ -1.26
CIITA-201ENST00000324288 SLC46A1Q96NT5 459 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 GATCO43716 136 aaKnown RBP7.15□□□□□ -1.26
CIITA-201ENST00000324288 TAS2R45P59539 299 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 MORN1Q5T089 497 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 SLCO4C1Q6ZQN7 724 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 TGIF2LXQ8IUE1 241 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 BCL7CQ8WUZ0 217 aaPredicted RBP7.15□□□□□ -1.26
CIITA-201ENST00000324288 PDXPQ96GD0 296 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 SNX22Q96L94 193 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 RTL8AQ9BWD3 113 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 GABARAPL3Q9BY60 117 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 ASIC5Q9NY37 505 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 KIAA1549Q9HCM3 1950 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 OR5B21A6NL26 309 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 KLRC4-KLRK1H3BQV0 150 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 TBXA2RP21731 343 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 TMEM183BQ1AE95 376 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 STUMQ69YW2 141 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 CISD2Q8N5K1 135 aaKnown RBP7.15□□□□□ -1.26
CIITA-201ENST00000324288 BCORP1Q8N888 145 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 OR5D13Q8NGL4 314 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 M1APQ8TC57 530 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 DTD1Q8TEA8 209 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 DERL3Q96Q80 235 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 ADH4P08319 380 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 UQCRFS1P47985 274 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 PRDX4Q13162 271 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 KLHDC1Q8N7A1 406 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 PATE1Q8WXA2 126 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 EDAQ92838 391 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 ZDHHC16Q969W1 377 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 GNPNAT1Q96EK6 184 aaPredicted RBP7.15□□□□□ -1.26
CIITA-201ENST00000324288 SIGLEC1Q9BZZ2 1709 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 P4HTMQ9NXG6 502 aa7.15□□□□□ -1.26
CIITA-201ENST00000324288 RRP8O43159 456 aaKnown RBP7.15□□□□□ -1.27
CIITA-201ENST00000324288 RPLP1P05386 114 aaKnown RBP7.15□□□□□ -1.27
CIITA-201ENST00000324288 GLRA1P23415 457 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 WDR31Q8NA23 367 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 OR10V1Q8NGI7 309 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 DOK5Q9P104 306 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 METTL12A8MUP2 240 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 IRS1P35568 1242 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 NOVA1P51513 510 aaKnown RBP7.15□□□□□ -1.27
CIITA-201ENST00000324288 SUCLG1P53597 346 aaKnown RBP7.15□□□□□ -1.27
CIITA-201ENST00000324288 INSM1Q01101 510 aaPredicted RBP7.15□□□□□ -1.27
CIITA-201ENST00000324288 MRPL43Q8N983 215 aaKnown RBP7.15□□□□□ -1.27
CIITA-201ENST00000324288 OR13H1Q8NG92 308 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 TMEM230Q96A57 120 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 ACY3Q96HD9 319 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 AURKAIP1Q9NWT8 199 aaPredicted RBP7.15□□□□□ -1.27
CIITA-201ENST00000324288 MRPS2Q9Y399 296 aaKnown RBP7.15□□□□□ -1.27
CIITA-201ENST00000324288 H3BMH7 237 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 CD14P08571 375 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 ZNF77Q15935 545 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 ZNF485Q8NCK3 441 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 MOB3AQ96BX8 217 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 ZNF552Q9H707 407 aaPredicted RBP7.15□□□□□ -1.27
CIITA-201ENST00000324288 KLK11Q9UBX7 282 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 PTPRFP10586 1907 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 ZNF737O75373 536 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 CD40P25942 277 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 ISOC2Q96AB3 205 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 MRPS24Q96EL2 167 aaKnown RBP7.15□□□□□ -1.27
CIITA-201ENST00000324288 NEURL2Q9BR09 285 aa7.15□□□□□ -1.27
CIITA-201ENST00000324288 FAM208BQ5VWN6 2430 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 ZNF785A8K8V0 405 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 TOX3O15405 576 aaPredicted RBP7.14□□□□□ -1.27
CIITA-201ENST00000324288 ICOSLGO75144 302 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 HSBP1O75506 76 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 HOXC8P31273 242 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 G6PCP35575 357 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 EIF1P41567 113 aaKnown RBP7.14□□□□□ -1.27
CIITA-201ENST00000324288 VWA2Q5GFL6 755 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 Q7L0L9 218 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 PLPP6Q8IY26 295 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 TMEM178AQ8NBL3 297 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 OR1J1Q8NGS3 322 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 SLAMF6Q96DU3 332 aa7.14□□□□□ -1.27
CIITA-201ENST00000324288 ATP5SQ99766 215 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms