RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 HLA-HP01893 362 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 DANCRP0C864 163 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 SMIM18P0DKX4 95 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 CALCBP10092 127 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 CLUP10909 449 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 SLC25A16P16260 332 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 ZNF20P17024 532 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 EEF1B2P24534 225 aaKnown RBP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 APEX1P27695 318 aaKnown RBP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 CDAP32320 146 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 SERPINF1P36955 418 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 WNT5AP41221 380 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 ATP1B3P54709 279 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 PPP3R1P63098 170 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 GNG3P63215 75 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 FAM3AP98173 230 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 EMX1Q04741 257 aaPredicted RBP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 HGFACQ04756 655 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 TSC22D1Q15714 1073 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 RSPO1Q2MKA7 263 aaPredicted RBP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 Q3ZCU0 254 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 WDR38Q5JTN6 314 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 SPIN3Q5JUX0 258 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 C1orf100Q5SVJ3 147 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 GLYATL3Q5SZD4 288 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 XAF1Q6GPH4 301 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 USP43Q70EL4 1123 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 GPR141Q7Z602 305 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 PNLDC1Q8NA58 520 aaKnown RBP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 OR1J1Q8NGS3 322 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 GATAD2BQ8WXI9 593 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 TSSK2Q96PF2 358 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 HIST1H2AAQ96QV6 131 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 FOXC2Q99958 501 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 FAM234AQ9H0X4 552 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 FN3KRPQ9HA64 309 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 SNTG1Q9NSN8 517 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 TMEM100Q9NV29 134 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 TREM2Q9NZC2 230 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 PKD1L2Q7Z442 2459 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 LOC107986453A0A1B0GWG9 222 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 PLSCR5A0PG75 271 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 NKX2-6A6NCS4 301 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 GGT3PA6NGU5 568 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 CD300LBA8K4G0 201 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 H7C1Q1 480 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 J3QT63 122 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 SULT1B1O43704 296 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 WISP2O76076 250 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 CYB5AP00167 134 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 HPXP02790 462 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 LCATP04180 440 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 LCKP06239 509 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 ANXA2P07355 339 aaKnown RBP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 RAB3AP20336 220 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 DNASE1P24855 282 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 CALCRP30988 508 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 KIR3DL2P43630 455 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 FABP6P51161 128 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 SRSF1Q07955 248 aaKnown RBP eCLIP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 BLMHQ13867 455 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 GLT8D1Q68CQ7 371 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 SP5Q6BEB4 398 aaPredicted RBP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 TRAT1Q6PIZ9 186 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 KCTD8Q6ZWB6 473 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 MEX3DQ86XN8 651 aaKnown RBP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 PHC2Q8IXK0 858 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 LRRC18Q8N456 261 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 ZNF676Q8N7Q3 588 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 CHST4Q8NCG5 386 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 LILRB1Q8NHL6 650 aaPredicted RBP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 ZNF671Q8TAW3 534 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 TBC1D15Q8TC07 691 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 KLF14Q8TD94 323 aaPredicted RBP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 OTULINQ96BN8 352 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 SORCS2Q96PQ0 1159 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 DERL3Q96Q80 235 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 PLEKHF2Q9H8W4 249 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 PLEKHA1Q9HB21 404 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 SPACA1Q9HBV2 294 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 TMEM138Q9NPI0 162 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 ACOXLQ9NUZ1 547 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 ABRACLQ9P1F3 81 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 ERVK-18Q9QC07 812 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 GLS2Q9UI32 602 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 ADAM30Q9UKF2 790 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 KLHDC2Q9Y2U9 406 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 NPTNQ9Y639 398 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 ATP23Q9Y6H3 246 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 ESPL1Q14674 2120 aa2.8□□□□□ -1.96
SCAMP1-201ENST00000320280 PPIAL4EA0A075B759 164 aa2.8□□□□□ -1.96
SCAMP1-201ENST00000320280 PPIAL4CA0A0B4J2A2 164 aa2.8□□□□□ -1.96
SCAMP1-201ENST00000320280 A0A0G2JK05 382 aa2.8□□□□□ -1.96
SCAMP1-201ENST00000320280 PQLC2LA1A4F0 135 aa2.8□□□□□ -1.96
SCAMP1-201ENST00000320280 FUOMA2VDF0 154 aa2.8□□□□□ -1.96
SCAMP1-201ENST00000320280 C17orf100A8MU93 164 aa2.8□□□□□ -1.96
SCAMP1-201ENST00000320280 FAM171A2A8MVW0 826 aa2.8□□□□□ -1.96
SCAMP1-201ENST00000320280 PPIAL4DF5H284 164 aa2.8□□□□□ -1.96
SCAMP1-201ENST00000320280 J3QLW9 94 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms