RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 EXTL1Q92935 676 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 FN3KRPQ9HA64 309 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 P4HTMQ9NXG6 502 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 H7BYZ3 331 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 OR2C1O95371 312 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 WISP3O95389 354 aaPredicted RBP11.45□□□□□ -0.58
PTCD1-201ENST00000292478 M1APQ8TC57 530 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 HGDQ93099 445 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 ALKBH3Q96Q83 286 aaPredicted RBP11.45□□□□□ -0.58
PTCD1-201ENST00000292478 RAB18Q9NP72 206 aa11.45□□□□□ -0.58
PTCD1-201ENST00000292478 CTDSPLO15194 276 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 MDH2P40926 338 aaKnown RBP11.44□□□□□ -0.58
PTCD1-201ENST00000292478 GABRA4P48169 554 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 NDUFA6P56556 154 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 UBE2G1P62253 170 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 BATFQ16520 125 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 WDR74Q6RFH5 385 aaPredicted RBP11.44□□□□□ -0.58
PTCD1-201ENST00000292478 TSEN54Q7Z6J9 526 aaKnown RBP11.44□□□□□ -0.58
PTCD1-201ENST00000292478 PINX1Q96BK5 328 aaKnown RBP11.44□□□□□ -0.58
PTCD1-201ENST00000292478 WDR89Q96FK6 387 aaPredicted RBP11.44□□□□□ -0.58
PTCD1-201ENST00000292478 RYDENQ9NUL5 291 aaKnown RBP11.44□□□□□ -0.58
PTCD1-201ENST00000292478 OCIAD1Q9NX40 245 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 SCN1AP35498 2009 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 FAM221AA4D161 298 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 PPP5D1E7EU14 171 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 HOXD11P31277 338 aaPredicted RBP11.44□□□□□ -0.58
PTCD1-201ENST00000292478 CDKN2AP42771 156 aaKnown RBP11.44□□□□□ -0.58
PTCD1-201ENST00000292478 ZNF239Q16600 458 aaKnown RBP11.44□□□□□ -0.58
PTCD1-201ENST00000292478 TRAT1Q6PIZ9 186 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 OR1J1Q8NGS3 322 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 MCHR2Q969V1 340 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 NTNG2Q96CW9 530 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 ZG16BQ96DA0 208 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 SOX7Q9BT81 388 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 ZFP64Q9NPA5 681 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 MT-CO3P00414 261 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 OR10J4P0C629 311 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 CD80P33681 288 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 BPIFB3P59826 476 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 DEFA6Q01524 100 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 KISS1Q15726 138 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 WIPI1Q5MNZ9 446 aaPredicted RBP11.44□□□□□ -0.58
PTCD1-201ENST00000292478 FBXW5Q969U6 566 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 ZNF331Q9NQX6 463 aaPredicted RBP11.44□□□□□ -0.58
PTCD1-201ENST00000292478 ZNF275Q9NSD4 429 aaPredicted RBP11.44□□□□□ -0.58
PTCD1-201ENST00000292478 CT62P0C5K7 136 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 PI3P19957 117 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 CSN1S1P47710 185 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 GUCA2AQ02747 115 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 CLLU1Q5K131 121 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 ZBTB37Q5TC79 503 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 GLCCI1Q86VQ1 547 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 OR6X1Q8NH79 312 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 LHX4Q969G2 390 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 COMMD5Q9GZQ3 224 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 TMED3Q9Y3Q3 217 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.44□□□□□ -0.58
PTCD1-201ENST00000292478 AQP7P3A6NL99 342 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 OGG1O15527 345 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 SPRY1O43609 319 aaPredicted RBP11.44□□□□□ -0.58
PTCD1-201ENST00000292478 ENDOGQ14249 297 aaKnown RBP11.44□□□□□ -0.58
PTCD1-201ENST00000292478 FAM219BQ5XKK7 198 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 DMKNQ6E0U4 476 aaPredicted RBP11.44□□□□□ -0.58
PTCD1-201ENST00000292478 TEX261Q6UWH6 196 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 PRSS42Q7Z5A4 293 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 C10orf90Q96M02 699 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 OR5V1Q9UGF6 321 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 U3KQ87 197 aa11.44□□□□□ -0.58
PTCD1-201ENST00000292478 CTAG2O75638 210 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 PTGFRP43088 359 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 BAMBIQ13145 260 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 KIAA0141Q14154 515 aaPredicted RBP11.43□□□□□ -0.58
PTCD1-201ENST00000292478 ZNF766Q5HY98 468 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 SKA3Q8IX90 412 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 GNG13Q9P2W3 67 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 OSGIN2Q9Y236 505 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 KIF13BQ9NQT8 1826 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 GSTZ1O43708 216 aaPredicted RBP11.43□□□□□ -0.58
PTCD1-201ENST00000292478 PGA3P0DJD8 388 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 MYF5P13349 255 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 TTC3P53804 2025 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 ARL16Q0P5N6 197 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 IGFBP7Q16270 282 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 ACER2Q5QJU3 275 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 ZNF787Q6DD87 383 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 ADPRHL1Q8NDY3 354 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 OR5AP2Q8NGF4 316 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 GAB2Q9UQC2 676 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 CROCCQ5TZA2 2017 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 UBE2G2P60604 165 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 TCTN1Q2MV58 587 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 PLA1AQ53H76 456 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 BTNL8Q6UX41 500 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 NUFIP2Q7Z417 695 aaKnown RBP11.43□□□□□ -0.58
PTCD1-201ENST00000292478 OR52B4Q8NGK2 314 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 OR8D4Q8NGM9 314 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 SP7Q8TDD2 431 aaPredicted RBP11.43□□□□□ -0.58
PTCD1-201ENST00000292478 PIK3IP1Q96FE7 263 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 VSTM2LQ96N03 204 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 PLEKHB1Q9UF11 243 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms