RNA–Protein interactions for RNA: ENST00000233025.11

SPCS1-201, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 1,082 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-201ENST00000233025 DCTN6O00399 190 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 SOCS2O14508 198 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 RER1O15258 196 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 SLC16A7O60669 478 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 PEX14O75381 377 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 KHDRBS3O75525 346 aaKnown RBP13.24□□□□□ -0.29
SPCS1-201ENST00000233025 TXNDC12O95881 172 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 LHBP01229 141 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 CCDC159P0C7I6 412 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 HIST1H3AP68431 136 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 KCNMB1Q16558 191 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 TMEM95Q3KNT9 176 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 FGD3Q5JSP0 725 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 HIST2H3PS2Q5TEC6 136 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 TEX36Q5VZQ5 186 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 CYP2R1Q6VVX0 501 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 HIST2H3AQ71DI3 136 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 ADCK1Q86TW2 530 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 GLB1L2Q8IW92 636 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 GCSAMQ8N6F7 178 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 OR1F12Q8NHA8 337 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 FAM162AQ96A26 154 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 APOBEC3DQ96AK3 386 aaPredicted RBP13.24□□□□□ -0.29
SPCS1-201ENST00000233025 NSMCE2Q96MF7 247 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 NUAK2Q9H093 628 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 AP4S1Q9Y587 144 aa13.24□□□□□ -0.29
SPCS1-201ENST00000233025 TCRBV3S1A0A5B6 114 aa13.23□□□□□ -0.29
SPCS1-201ENST00000233025 ARPC2O15144 300 aa13.23□□□□□ -0.29
SPCS1-201ENST00000233025 CDKN2AP42771 156 aaKnown RBP13.23□□□□□ -0.29
SPCS1-201ENST00000233025 POU4F2Q12837 409 aa13.23□□□□□ -0.29
SPCS1-201ENST00000233025 Q6ZS46 218 aa13.23□□□□□ -0.29
SPCS1-201ENST00000233025 CYP4Z1Q86W10 505 aa13.23□□□□□ -0.29
SPCS1-201ENST00000233025 PQLC1Q8N2U9 271 aa13.23□□□□□ -0.29
SPCS1-201ENST00000233025 OR5AU1Q8NGC0 362 aa13.23□□□□□ -0.29
SPCS1-201ENST00000233025 DUS3LQ96G46 650 aaKnown RBP13.23□□□□□ -0.29
SPCS1-201ENST00000233025 TSSK2Q96PF2 358 aa13.23□□□□□ -0.29
SPCS1-201ENST00000233025 NDEL1Q9GZM8 345 aa13.23□□□□□ -0.29
SPCS1-201ENST00000233025 RERGLQ9H628 205 aa13.23□□□□□ -0.29
SPCS1-201ENST00000233025 WDR76Q9H967 626 aa13.23□□□□□ -0.29
SPCS1-201ENST00000233025 IER3IP1Q9Y5U9 82 aa13.23□□□□□ -0.29
SPCS1-201ENST00000233025 LHFPL6Q9Y693 200 aa13.23□□□□□ -0.29
SPCS1-201ENST00000233025 IGLV1-36A0A0B4J1U3 117 aa13.22□□□□□ -0.29
SPCS1-201ENST00000233025 DIRAS1O95057 198 aa13.22□□□□□ -0.29
SPCS1-201ENST00000233025 CLIC3O95833 236 aa13.22□□□□□ -0.29
SPCS1-201ENST00000233025 RHCEP18577 417 aa13.22□□□□□ -0.29
SPCS1-201ENST00000233025 CNN3Q15417 329 aaKnown RBP13.22□□□□□ -0.29
SPCS1-201ENST00000233025 MEP1BQ16820 701 aa13.22□□□□□ -0.29
SPCS1-201ENST00000233025 KRTAP27-1Q3LI81 207 aa13.22□□□□□ -0.29
SPCS1-201ENST00000233025 GLYATQ6IB77 296 aa13.22□□□□□ -0.29
SPCS1-201ENST00000233025 ADAMTSL5Q6ZMM2 481 aa13.22□□□□□ -0.29
SPCS1-201ENST00000233025 DPY19L2P2Q6ZN68 376 aa13.22□□□□□ -0.29
SPCS1-201ENST00000233025 RRM2BQ7LG56 351 aa13.22□□□□□ -0.29
SPCS1-201ENST00000233025 FAM216BQ8N7L0 139 aa13.22□□□□□ -0.29
SPCS1-201ENST00000233025 VCXQ9H320 206 aa13.22□□□□□ -0.29
SPCS1-201ENST00000233025 METTL8Q9H825 291 aaKnown RBP13.22□□□□□ -0.29
SPCS1-201ENST00000233025 RPS6KA6Q9UK32 745 aa13.22□□□□□ -0.29
SPCS1-201ENST00000233025 TSSC4Q9Y5U2 329 aaPredicted RBP13.22□□□□□ -0.29
SPCS1-201ENST00000233025 SORL1Q92673 2214 aa13.22□□□□□ -0.29
SPCS1-201ENST00000233025 IGHV3OR15-7A0A075B7D8 119 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 DHRS12A0PJE2 317 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 H3BNX3 289 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 M0R1W7 72 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 SYNGR1O43759 233 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 SEMG1P04279 462 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 FCGR1AP12314 374 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 ATP6V1B2P21281 511 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 DGCR2P98153 550 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 RSPO1Q2MKA7 263 aaPredicted RBP13.21□□□□□ -0.29
SPCS1-201ENST00000233025 ZFAND6Q6FIF0 208 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 COLCA1Q6ZS62 124 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 SLC26A10Q8NG04 563 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 DNAJC9Q8WXX5 260 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 RCHY1Q96PM5 261 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 CCL13Q99616 98 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 COQ7Q99807 217 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 PRSS22Q9GZN4 317 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 HDHD2Q9H0R4 259 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 YY1AP1Q9H869 796 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 DCAF13Q9NV06 445 aaKnown RBP13.21□□□□□ -0.29
SPCS1-201ENST00000233025 POLR1DQ9Y2S0 133 aa13.21□□□□□ -0.29
SPCS1-201ENST00000233025 UNC119BA6NIH7 251 aa13.2□□□□□ -0.3
SPCS1-201ENST00000233025 HOXB6P17509 224 aaKnown RBP13.2□□□□□ -0.3
SPCS1-201ENST00000233025 VDAC2P45880 294 aaPredicted RBP13.2□□□□□ -0.3
SPCS1-201ENST00000233025 WDR38Q5JTN6 314 aa13.2□□□□□ -0.3
SPCS1-201ENST00000233025 CORO6Q6QEF8 472 aa13.2□□□□□ -0.3
SPCS1-201ENST00000233025 SMARCD3Q6STE5 483 aa13.2□□□□□ -0.3
SPCS1-201ENST00000233025 ETV3LQ6ZN32 361 aa13.2□□□□□ -0.3
SPCS1-201ENST00000233025 CFAP77Q6ZQR2 320 aa13.2□□□□□ -0.3
SPCS1-201ENST00000233025 ZNF826PQ6ZT77 177 aa13.2□□□□□ -0.3
SPCS1-201ENST00000233025 MRPL41Q8IXM3 137 aaKnown RBP13.2□□□□□ -0.3
SPCS1-201ENST00000233025 PLPP7Q8NBV4 271 aa13.2□□□□□ -0.3
SPCS1-201ENST00000233025 FANK1Q8TC84 345 aa13.2□□□□□ -0.3
SPCS1-201ENST00000233025 ARMC1Q9NVT9 282 aa13.2□□□□□ -0.3
SPCS1-201ENST00000233025 C1orf123Q9NWV4 160 aa13.2□□□□□ -0.3
SPCS1-201ENST00000233025 AURKCQ9UQB9 309 aa13.2□□□□□ -0.3
SPCS1-201ENST00000233025 TCF19Q9Y242 345 aa13.2□□□□□ -0.3
SPCS1-201ENST00000233025 SF3B6Q9Y3B4 125 aaKnown RBP13.2□□□□□ -0.3
SPCS1-201ENST00000233025 TCRBV4S1A1TA0A5B7 111 aa13.19□□□□□ -0.3
SPCS1-201ENST00000233025 NKX6-3A6NJ46 265 aa13.19□□□□□ -0.3
SPCS1-201ENST00000233025 CASQ2O14958 399 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms