RNA–Protein interactions for RNA: ENST00000209728.8

CDC6-201, Transcript of cell division cycle 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC6, Length 4,810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-201ENST00000209728 SUMO3P55854 103 aaPredicted RBP11.31□□□□□ -0.6
CDC6-201ENST00000209728 PNLIPRP3Q17RR3 467 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 BRICD5Q6PL45 260 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 LHFPL2Q6ZUX7 228 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 MS4A7Q9GZW8 240 aaPredicted RBP11.31□□□□□ -0.6
CDC6-201ENST00000209728 CA10Q9NS85 328 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 GHRLQ9UBU3 117 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 MED19A0JLT2 244 aaPredicted RBP11.31□□□□□ -0.6
CDC6-201ENST00000209728 PRSS44E7EML9 344 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 IGF2P01344 180 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 ANKRD34CP0C6C1 535 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 EFNB2P52799 333 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 CRYBA2P53672 197 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 EDDM3BP56851 147 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 SCAND1P57086 179 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 MPPED2Q15777 294 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 FAM199XQ6PEV8 388 aaPredicted RBP11.31□□□□□ -0.6
CDC6-201ENST00000209728 THNSL2Q86YJ6 484 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 PP6455Q8WZ26 134 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 UQCC2Q9BRT2 126 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 MYOTQ9UBF9 498 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 ZNF831Q5JPB2 1677 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 ARID2Q68CP9 1835 aa11.31□□□□□ -0.6
CDC6-201ENST00000209728 C7orf66A4D0T2 115 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 SFTA3P0C7M3 94 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 C6orf201Q7Z4U5 140 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 CDC20BQ86Y33 519 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 OSR2Q8N2R0 312 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 ZNF808Q8N4W9 903 aaPredicted RBP11.3□□□□□ -0.6
CDC6-201ENST00000209728 OR5M8Q8NGP6 311 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 OR2AE1Q8NHA4 323 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 TGIF2Q9GZN2 237 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 SH3BGRL2Q9UJC5 107 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 PLXNB2O15031 1838 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 MT-ND4LP03901 98 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 CT45A8P0DMV1 189 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 CT45A9P0DMV2 189 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 IAPPP10997 89 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 SNCAP37840 140 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 PSMB3P49720 205 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 CEACAM16Q2WEN9 425 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 C4orf17Q53FE4 359 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 CT45A2Q5DJT8 189 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 NANPQ8TBE9 248 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 PRRX2Q99811 253 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 NDRG3Q9UGV2 375 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 C17orf112F2Z3M2 114 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 PIAS2O75928 621 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 SLC37A1P57057 533 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 DEGS2Q6QHC5 323 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 GNPNAT1Q96EK6 184 aaPredicted RBP11.3□□□□□ -0.6
CDC6-201ENST00000209728 TRAF4Q9BUZ4 470 aaPredicted RBP11.3□□□□□ -0.6
CDC6-201ENST00000209728 CHST6Q9GZX3 395 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 GHITMQ9H3K2 345 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 UFSP2Q9NUQ7 469 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 ERVH48-1M5A8F1 160 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 SIRPB1O00241 398 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 PTP4A3O75365 173 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 FPR2P25090 351 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 ACAA2P42765 397 aaKnown RBP11.3□□□□□ -0.6
CDC6-201ENST00000209728 PTGFRP43088 359 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 CLDN15P56746 228 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 TSEN54Q7Z6J9 526 aaKnown RBP11.3□□□□□ -0.6
CDC6-201ENST00000209728 OR4A16Q8NH70 328 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 CCDC74BQ96LY2 380 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 CRLF2Q9HC73 371 aa11.3□□□□□ -0.6
CDC6-201ENST00000209728 PCDHGA9Q9Y5G4 932 aaKnown RBP11.3□□□□□ -0.6
CDC6-201ENST00000209728 DUS4LO95620 317 aaKnown RBP11.29□□□□□ -0.6
CDC6-201ENST00000209728 CLEC12BQ2HXU8 276 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 SLC38A6Q8IZM9 456 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 GABRG3Q99928 467 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 ICAM5Q9UMF0 924 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 ZNF638Q14966 1978 aaKnown RBP11.29□□□□□ -0.6
CDC6-201ENST00000209728 TDRD15B5MCY1 1934 aaKnown RBP11.29□□□□□ -0.6
CDC6-201ENST00000209728 HOXC4P09017 264 aaPredicted RBP11.29□□□□□ -0.6
CDC6-201ENST00000209728 TFF2Q03403 129 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 CLN3Q13286 438 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 PLGLAQ15195 96 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 CLPPQ16740 277 aaPredicted RBP11.29□□□□□ -0.6
CDC6-201ENST00000209728 MIDNQ504T8 468 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 DGAT2L6Q6ZPD8 337 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 KMT5CQ86Y97 462 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 FAM219AQ8IW50 185 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 HPSE2Q8WWQ2 592 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 C22orf15Q8WYQ4 148 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 RAB39BQ96DA2 213 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 FAAP24Q9BTP7 215 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 RAB9BQ9NP90 201 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 YBX2Q9Y2T7 364 aaKnown RBP11.29□□□□□ -0.6
CDC6-201ENST00000209728 STRAPQ9Y3F4 350 aaKnown RBP11.29□□□□□ -0.6
CDC6-201ENST00000209728 IGHV1OR21-1A0A087WYE8 117 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 CTXN2P0C2S0 81 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 PTAFRP25105 342 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 THBS4P35443 961 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 HOXA1P49639 335 aaPredicted RBP11.29□□□□□ -0.6
CDC6-201ENST00000209728 TMEM41BQ5BJD5 291 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 NECAP1Q8NC96 275 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 LIN37Q96GY3 246 aaPredicted RBP11.29□□□□□ -0.6
CDC6-201ENST00000209728 AP1S3Q96PC3 154 aa11.29□□□□□ -0.6
CDC6-201ENST00000209728 PJVKQ0ZLH3 352 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms