RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 C16orf90A8MZG2 172 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 CXCL11O14625 94 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 FKBP6O75344 327 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 SEMA3DO95025 777 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 TSPAN13O95857 204 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 P0C880 135 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 NAA10P41227 235 aaPredicted RBP1.48□□□□□ -2.17
VBP1-204ENST00000625964 TNFSF9P41273 254 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 RBX1P62877 108 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 TGM3Q08188 693 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 SRSF5Q13243 272 aaKnown RBP1.48□□□□□ -2.17
VBP1-204ENST00000625964 ADNP2Q6IQ32 1131 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 RNASEKQ6P5S7 137 aaKnown RBP1.48□□□□□ -2.17
VBP1-204ENST00000625964 TMEM107Q6UX40 140 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 MBOAT1Q6ZNC8 495 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 ERO1BQ86YB8 467 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 PRELID2Q8N945 189 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 SPANXA2-OT1Q8N9U9 137 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 C1orf64Q8NEQ6 169 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 KIFAP3Q92845 792 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 NT5C3BQ969T7 300 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 TMEM230Q96A57 120 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 LZTS2Q9BRK4 669 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 GGTLC1Q9BX51 225 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 ZNF230Q9UIE0 474 aaPredicted RBP1.48□□□□□ -2.17
VBP1-204ENST00000625964 CSDC2Q9Y534 153 aaKnown RBP1.48□□□□□ -2.17
VBP1-204ENST00000625964 ALPK3Q96L96 1907 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 USP24Q9UPU5 2620 aa1.48□□□□□ -2.17
VBP1-204ENST00000625964 ASH1LQ9NR48 2969 aaKnown RBP1.48□□□□□ -2.17
VBP1-204ENST00000625964 PRRC2BQ5JSZ5 2229 aaKnown RBP1.48□□□□□ -2.17
VBP1-204ENST00000625964 COL1A1P02452 1464 aaPredicted RBP1.47□□□□□ -2.17
VBP1-204ENST00000625964 ZNF462Q96JM2 2506 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 ROCK2O75116 1388 aaKnown RBP1.47□□□□□ -2.17
VBP1-204ENST00000625964 COL5A1P20908 1838 aaPredicted RBP1.47□□□□□ -2.17
VBP1-204ENST00000625964 BRWD1Q9NSI6 2320 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 SMCO2A6NFE2 343 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 GABRR3A8MPY1 467 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 LYRM9A8MSI8 78 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 NDUFC2-KCTD14E9PQ53 114 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 H7C417 338 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 AIM2O14862 343 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 CYB5R3P00387 301 aaPredicted RBP1.47□□□□□ -2.17
VBP1-204ENST00000625964 IGHV3-11P01762 117 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 SLC2A3P11169 496 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 U2AF2P26368 475 aaKnown RBP eCLIP1.47□□□□□ -2.17
VBP1-204ENST00000625964 NBL1P41271 181 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 PRLHRP49683 370 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 ACLYP53396 1101 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 CDH6P55285 790 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 RPS11P62280 158 aaKnown RBP eCLIP1.47□□□□□ -2.17
VBP1-204ENST00000625964 RPL23P62829 140 aaKnown RBP1.47□□□□□ -2.17
VBP1-204ENST00000625964 PRKCDQ05655 676 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 PPM1LQ5SGD2 360 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 SASS6Q6UVJ0 657 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 NECAB1Q8N987 351 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 CHST4Q8NCG5 386 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 OR11H7Q8NGC8 314 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 RSPH1Q8WYR4 309 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 TVP23CQ96ET8 276 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 UPF3BQ9BZI7 483 aaKnown RBP1.47□□□□□ -2.17
VBP1-204ENST00000625964 ILKAPQ9H0C8 392 aaPredicted RBP1.47□□□□□ -2.17
VBP1-204ENST00000625964 DHX35Q9H5Z1 703 aaKnown RBP1.47□□□□□ -2.17
VBP1-204ENST00000625964 SLC2A8Q9NY64 477 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 UXTQ9UBK9 157 aaPredicted RBP1.47□□□□□ -2.17
VBP1-204ENST00000625964 MTFP1Q9UDX5 166 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 MTCH2Q9Y6C9 303 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 CFAP47Q6ZTR5 3102 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 SCN7AQ01118 1682 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 HELZ2Q9BYK8 2649 aaKnown RBP1.47□□□□□ -2.17
VBP1-204ENST00000625964 MYO18BQ8IUG5 2567 aa1.47□□□□□ -2.17
VBP1-204ENST00000625964 CNOT1A5YKK6 2376 aaKnown RBP1.46□□□□□ -2.18
VBP1-204ENST00000625964 IGHV3-49A0A0A0MS15 119 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 OR5H1A6NKK0 313 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 KRBOX1C9JBD0 128 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 EIF4E2O60573 245 aaKnown RBP1.46□□□□□ -2.18
VBP1-204ENST00000625964 EIF1BO60739 113 aaKnown RBP1.46□□□□□ -2.18
VBP1-204ENST00000625964 NDUFB10O96000 172 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 IL9P15248 144 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 EIF1P41567 113 aaKnown RBP1.46□□□□□ -2.18
VBP1-204ENST00000625964 GFERP55789 205 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 STXBP1P61764 594 aaKnown RBP1.46□□□□□ -2.18
VBP1-204ENST00000625964 PRR3P79522 188 aaKnown RBP1.46□□□□□ -2.18
VBP1-204ENST00000625964 RBMY1FQ15415 496 aaKnown RBP1.46□□□□□ -2.18
VBP1-204ENST00000625964 PPP1R7Q15435 360 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 TEX30Q5JUR7 227 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 UBE2UQ5VVX9 321 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 MRPL55Q7Z7F7 128 aaKnown RBP1.46□□□□□ -2.18
VBP1-204ENST00000625964 ZNF101Q8IZC7 436 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 CSGALNACT2Q8N6G5 542 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 ZNF680Q8NEM1 530 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 OR9K2Q8NGE7 335 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 KCNG3Q8TAE7 436 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 EEF1AKMT3Q96AZ1 226 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 WDR34Q96EX3 536 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 RHOXF2Q9BQY4 288 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 SHANK2-AS3Q9BTD1 123 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 ANGPTL4Q9BY76 406 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 COA1Q9GZY4 146 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 OR51M1Q9H341 326 aa1.46□□□□□ -2.18
VBP1-204ENST00000625964 HRASLS2Q9NWW9 162 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms