RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 A0A1B0GVI7 797 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 PLSCR5A0PG75 271 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 TMEM212A6NML5 194 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 ZNF850A8MQ14 1090 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 IGHV4-39P01824 125 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 ISG15P05161 165 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 SMIM18P0DKX4 95 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 ATP6V1B1P15313 513 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 SOX2P48431 317 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 PPOXP50336 477 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 NEDD8Q15843 81 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 CEP78Q5JTW2 689 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 ASPHD2Q6ICH7 369 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 DOK3Q7L591 496 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 CDH24Q86UP0 819 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 SEMA6DQ8NFY4 1073 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 TSPAN14Q8NG11 270 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 PIGCQ92535 297 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 ELMOD3Q96FG2 381 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 MGLLQ99685 303 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 PAPOLGQ9BWT3 736 aaKnown RBP11.58□□□□□ -0.56
NEK3-210ENST00000620675 CACNG2Q9Y698 323 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 TLN2Q9Y4G6 2542 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 H7C417 338 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 PLPP2O43688 288 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 ACHEP22303 614 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 ACSM1Q08AH1 577 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 SSX1Q16384 188 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 KCTD8Q6ZWB6 473 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 UBASH3BQ8TF42 649 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 FGGYQ96C11 551 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 MYCBPQ99417 103 aaPredicted RBP11.58□□□□□ -0.56
NEK3-210ENST00000620675 OPA3Q9H6K4 179 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 TMEM100Q9NV29 134 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 ZNF701Q9NV72 531 aaPredicted RBP11.58□□□□□ -0.56
NEK3-210ENST00000620675 DCAF16Q9NXF7 216 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 ZNF391Q9UJN7 358 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 HHLA2Q9UM44 414 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 PMF1-BGLAPU3KQ54 211 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 ABCA2Q9BZC7 2435 aa11.58□□□□□ -0.56
NEK3-210ENST00000620675 A0A1B0GWJ7 208 aa11.57□□□□□ -0.56
NEK3-210ENST00000620675 LOC390937A0A1W2PQ73 354 aa11.57□□□□□ -0.56
NEK3-210ENST00000620675 C3orf80F5H4A9 247 aa11.57□□□□□ -0.56
NEK3-210ENST00000620675 CFL1P23528 166 aaKnown RBP11.57□□□□□ -0.56
NEK3-210ENST00000620675 MAP2K3P46734 347 aa11.57□□□□□ -0.56
NEK3-210ENST00000620675 PTH2RP49190 550 aa11.57□□□□□ -0.56
NEK3-210ENST00000620675 MRPL28Q13084 256 aaKnown RBP11.57□□□□□ -0.56
NEK3-210ENST00000620675 PRDX4Q13162 271 aa11.57□□□□□ -0.56
NEK3-210ENST00000620675 MAB21L1Q13394 359 aa11.57□□□□□ -0.56
NEK3-210ENST00000620675 TMEM244Q5VVB8 128 aa11.57□□□□□ -0.56
NEK3-210ENST00000620675 RNF144BQ7Z419 303 aa11.57□□□□□ -0.56
NEK3-210ENST00000620675 WDR86Q86TI4 376 aa11.57□□□□□ -0.56
NEK3-210ENST00000620675 HPSE2Q8WWQ2 592 aa11.57□□□□□ -0.56
NEK3-210ENST00000620675 TMEM203Q969S6 136 aa11.57□□□□□ -0.56
NEK3-210ENST00000620675 TMED9Q9BVK6 235 aa11.57□□□□□ -0.56
NEK3-210ENST00000620675 GPR173Q9NS66 373 aa11.57□□□□□ -0.56
NEK3-210ENST00000620675 MRPL15Q9P015 296 aaKnown RBP11.57□□□□□ -0.56
NEK3-210ENST00000620675 YLPM1P49750 1951 aaKnown RBP11.57□□□□□ -0.56
NEK3-210ENST00000620675 DOCK11Q5JSL3 2073 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 LOC100289279A0A1B0GTE1 492 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 A0A1W2PPK0 400 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 DNASE1P24855 282 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 RPS25P62851 125 aaKnown RBP11.56□□□□□ -0.56
NEK3-210ENST00000620675 RIPPLY1Q0D2K3 151 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 DEFB113Q30KQ7 82 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 ARMCX4Q5H9R4 360 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 UBE2UQ5VVX9 321 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 OR13C3Q8NGS6 347 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 OR13G1Q8NGZ3 307 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 ITLN1Q8WWA0 313 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 PIGTQ969N2 578 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 ITPKCQ96DU7 683 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 OR2V2Q96R30 315 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 NR1H4Q96RI1 486 aaPredicted RBP11.56□□□□□ -0.56
NEK3-210ENST00000620675 ADAT1Q9BUB4 502 aaKnown RBP11.56□□□□□ -0.56
NEK3-210ENST00000620675 COMMD4Q9H0A8 199 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 MS4A5Q9H3V2 200 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 CXorf56Q9H5V9 222 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 ZNF281Q9Y2X9 895 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 ZNF816-ZNF321PA0A0X1KG74 233 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 GMDSO60547 372 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 CDC14BO60729 498 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 MRPS14O60783 128 aaKnown RBP11.56□□□□□ -0.56
NEK3-210ENST00000620675 RPSAP08865 295 aaKnown RBP11.56□□□□□ -0.56
NEK3-210ENST00000620675 PSMB9P28065 219 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 THBS2P35442 1172 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 LIPAP38571 399 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 DDOSTP39656 456 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 GP2P55259 537 aaKnown RBP11.56□□□□□ -0.56
NEK3-210ENST00000620675 BDH1Q02338 343 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 MLLT11Q13015 90 aaPredicted RBP11.56□□□□□ -0.56
NEK3-210ENST00000620675 UBE2V2Q15819 145 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 FAM27D1Q5T7N8 215 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 PRAMEF6Q5VXH4 476 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 ZNF367Q7RTV3 350 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 PHC2Q8IXK0 858 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 SVOPQ8N4V2 548 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 CSNK2A3Q8NEV1 391 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 NPRL2Q8WTW4 380 aa11.56□□□□□ -0.56
NEK3-210ENST00000620675 OR14A2Q96R54 314 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms