RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 RAI1Q7Z5J4 1906 aaPredicted RBP13.3□□□□□ -0.28
PCDHGC3-204ENST00000617222 DSCAMO60469 2012 aa13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 MAGEA13PA6NCF6 341 aa13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 ZNF850A8MQ14 1090 aa13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 CST4P01036 141 aa13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 CPEP16870 476 aa13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 GNALP38405 381 aa13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 SOX2P48431 317 aa13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 ZBTB37Q5TC79 503 aa13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 FTMTQ8N4E7 242 aa13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 OR10AD1Q8NGE0 317 aa13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 TSEN15Q8WW01 171 aaKnown RBP13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 DVL3Q92997 716 aaPredicted RBP13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 ELMOD3Q96FG2 381 aa13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 SLC22A4Q9H015 551 aa13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 RAB1BQ9H0U4 201 aa13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 PLEKHA1Q9HB21 404 aa13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 ZDHHC8Q9ULC8 765 aa13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 DHDHQ9UQ10 334 aa13.29□□□□□ -0.28
PCDHGC3-204ENST00000617222 HRNRQ86YZ3 2850 aaPredicted RBP13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 TRIM64CA6NLI5 447 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 DHRS7CA6NNS2 312 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 H7C417 338 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 MLNRO43193 412 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 OCM2P0CE71 109 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 SMIM18P0DKX4 95 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 ZNF20P17024 532 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 RPS11P62280 158 aaKnown RBP eCLIP13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 PRDX4Q13162 271 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 OR8G1Q15617 311 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 YIF1BQ5BJH7 314 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 DMRTC1Q5HYR2 192 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 MOB3CQ70IA8 216 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 PHC2Q8IXK0 858 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 TMEM203Q969S6 136 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 ADAT3Q96EY9 351 aaPredicted RBP13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 SORCS2Q96PQ0 1159 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 DIRC2Q96SL1 478 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 TMED9Q9BVK6 235 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 VCX3AQ9NNX9 186 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 GPR173Q9NS66 373 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 ABCA12Q86UK0 2595 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 CENPEQ02224 2701 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 USF3Q68DE3 2245 aa13.28□□□□□ -0.28
PCDHGC3-204ENST00000617222 UNC79Q9P2D8 2635 aa13.27□□□□□ -0.28
PCDHGC3-204ENST00000617222 DCHS2Q6V1P9 2916 aa13.27□□□□□ -0.28
PCDHGC3-204ENST00000617222 TRBV5-5A0A0J9YX44 114 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 A0A1B0GWJ7 208 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 F5H5P2 479 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 TPD52L2O43399 206 aaKnown RBP13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 GMDSO60547 372 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 NDUFS7O75251 213 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 NRASP01111 189 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 ERCC1P07992 297 aaPredicted RBP13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 ADH4P08319 380 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 TNFSF4P23510 183 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 RPS25P62851 125 aaKnown RBP13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 CCL8P80075 99 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 TNFAIP6P98066 277 aaPredicted RBP13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 SSX1Q16384 188 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 PCGF3Q3KNV8 242 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 SPRNQ5BIV9 151 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 CEP78Q5JTW2 689 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 CLVS2Q5SYC1 327 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 SYT6Q5T7P8 510 aaPredicted RBP13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 KRT74Q7RTS7 529 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 CDH24Q86UP0 819 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 ZDHHC23Q8IYP9 409 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 MS4A15Q8N5U1 240 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 OR8S1Q8NH09 359 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 MUL1Q969V5 352 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 C10orf35Q96D05 121 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 TRMT61AQ96FX7 289 aaKnown RBP13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 HIST1H2AAQ96QV6 131 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 ADAT1Q9BUB4 502 aaKnown RBP13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 DECR2Q9NUI1 292 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 ZNF701Q9NV72 531 aaPredicted RBP13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 NKIRAS2Q9NYR9 191 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 NOP16Q9Y3C1 178 aaKnown RBP13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 MPC1Q9Y5U8 109 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 FBN2P35556 2912 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 CRYBG3Q68DQ2 2970 aa13.27□□□□□ -0.29
PCDHGC3-204ENST00000617222 FLNBO75369 2602 aaKnown RBP13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 CELSR2Q9HCU4 2923 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 IGHV3-64DA0A0J9YX35 117 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 A0A1W2PPK0 400 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 ANKRD61A6NGH8 418 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 ANXA2P2A6NMY6 339 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 SERPINA3P01011 423 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 HPXP02790 462 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 GP2P55259 537 aaKnown RBP13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 ATP5J2P56134 94 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 DEFB113Q30KQ7 82 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 Q499Y3 187 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 FAM209AQ5JX71 171 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 ARFGEF3Q5TH69 2177 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 TMEM42Q69YG0 159 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 SPERTQ8NA61 448 aa13.26□□□□□ -0.29
PCDHGC3-204ENST00000617222 UBASH3BQ8TF42 649 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms