RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 OR51E1Q8TCB6 317 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 RAB7BQ96AH8 199 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 ANKRD9Q96BM1 317 aaPredicted RBP5.94□□□□□ -1.46
LMO3-235ENST00000616247 PRRX2Q99811 253 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 TIMM29Q9BSF4 260 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 LMF2Q9BU23 707 aaKnown RBP5.94□□□□□ -1.46
LMO3-235ENST00000616247 TMEM59Q9BXS4 323 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 TEX101Q9BY14 249 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 TBL1XR1Q9BZK7 514 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 SLC35B3Q9H1N7 401 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 OR10A5Q9H207 317 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 SLC26A1Q9H2B4 701 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 RNF122Q9H9V4 155 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 RAB18Q9NP72 206 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 PARP11Q9NR21 331 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 DENND4CQ5VZ89 1909 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 KIAA0100Q14667 2235 aaKnown RBP5.94□□□□□ -1.46
LMO3-235ENST00000616247 TGIF2-C20orf24A0A0A6YYL0 155 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 H0YL77 283 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 K7EQS6 105 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 CYR61O00622 381 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 HCRTR1O43613 425 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 BCKDHBP21953 392 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 HSD11B1P28845 292 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 BLVRBP30043 206 aaPredicted RBP5.94□□□□□ -1.46
LMO3-235ENST00000616247 PPM1AP35813 382 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 CDX1P47902 265 aaPredicted RBP5.94□□□□□ -1.46
LMO3-235ENST00000616247 UNC119Q13432 240 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 HNF4GQ14541 408 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 CARD17Q5XLA6 110 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 ZNF784Q8NCA9 323 aaPredicted RBP5.94□□□□□ -1.46
LMO3-235ENST00000616247 OR5D14Q8NGL3 314 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 OR52N5Q8NH56 324 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 OR1E3Q8WZA6 343 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 MRPL24Q96A35 216 aaKnown RBP5.94□□□□□ -1.46
LMO3-235ENST00000616247 ADAT3Q96EY9 351 aaPredicted RBP5.94□□□□□ -1.46
LMO3-235ENST00000616247 GDE1Q9NZC3 331 aa5.94□□□□□ -1.46
LMO3-235ENST00000616247 PRSS38A1L453 326 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 ZNF850A8MQ14 1090 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 NPIPA5E9PKD4 350 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 STMND1H3BQB6 276 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 TAAR5O14804 337 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 IFNA10P01566 189 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 IGHV2-5P01817 119 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 THEGLP0DJG4 465 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 GP1BBP13224 206 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 FOSL2P15408 326 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 HOXA5P20719 270 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 CSRP1P21291 193 aaKnown RBP5.93□□□□□ -1.46
LMO3-235ENST00000616247 GABRR1P24046 479 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 IL12BP29460 328 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 RPS23P62266 143 aaKnown RBP5.93□□□□□ -1.46
LMO3-235ENST00000616247 HGFACQ04756 655 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 MGAT2Q10469 447 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 ZNF239Q16600 458 aaKnown RBP5.93□□□□□ -1.46
LMO3-235ENST00000616247 OPN5Q6U736 354 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 HOGA1Q86XE5 327 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 ARRDC1Q8N5I2 433 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 TMEM217Q8N7C4 229 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 HPSE2Q8WWQ2 592 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 AQP3Q92482 292 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 RSPRY1Q96DX4 576 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 SNX22Q96L94 193 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 AQP10Q96PS8 301 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 KIR3DX1Q9H7L2 352 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 MYOZ1Q9NP98 299 aaPredicted RBP5.93□□□□□ -1.46
LMO3-235ENST00000616247 UBQLN4Q9NRR5 601 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 MED29Q9NX70 200 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 NPIPA1Q9UND3 350 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 B3GALT5Q9Y2C3 310 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 FAM221AA4D161 298 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 ZNF724A8MTY0 619 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 TERTO14746 1132 aaKnown RBP5.93□□□□□ -1.46
LMO3-235ENST00000616247 FGF19O95750 216 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 MELTFP08582 738 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 SNRPCP09234 159 aaKnown RBP5.93□□□□□ -1.46
LMO3-235ENST00000616247 HLA-DOBP13765 273 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 ZNF708P17019 499 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 HLA-GP17693 338 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 CTNNB1P35222 781 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 OPRM1P35372 400 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 SNCAP37840 140 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 OR3A4PP47883 348 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 RPL27P61353 136 aaKnown RBP5.93□□□□□ -1.46
LMO3-235ENST00000616247 INSM1Q01101 510 aaPredicted RBP5.93□□□□□ -1.46
LMO3-235ENST00000616247 NHLH2Q02577 135 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 EGR4Q05215 589 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 HIST2H3PS2Q5TEC6 136 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 C1orf189Q5VU69 101 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 ZNF385CQ66K41 422 aaPredicted RBP5.93□□□□□ -1.46
LMO3-235ENST00000616247 TMEM123Q8N131 208 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 RPS4Y2Q8TD47 263 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 THAP3Q8WTV1 239 aaPredicted RBP5.93□□□□□ -1.46
LMO3-235ENST00000616247 GTF3AQ92664 365 aaKnown RBP5.93□□□□□ -1.46
LMO3-235ENST00000616247 TMEM230Q96A57 120 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 MISP3Q96FF7 219 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 ZNF2Q9BSG1 426 aaPredicted RBP5.93□□□□□ -1.46
LMO3-235ENST00000616247 FBRSQ9HAH7 460 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 SOHLH2Q9NX45 425 aa5.93□□□□□ -1.46
LMO3-235ENST00000616247 PLA2G2EQ9NZK7 142 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms