RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 PARPBPQ9NWS1 579 aa9.81□□□□□ -0.84
CDH4-202ENST00000611855 RCL1Q9Y2P8 373 aaKnown RBP9.81□□□□□ -0.84
CDH4-202ENST00000611855 TMEM184BQ9Y519 407 aaPredicted RBP9.81□□□□□ -0.84
CDH4-202ENST00000611855 C17orf105B2RV13 164 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 RAMP1O60894 148 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 APODP05090 189 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 HNRNPA1P09651 372 aaKnown RBP eCLIP9.8□□□□□ -0.84
CDH4-202ENST00000611855 GIMD1P0DJR0 217 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 HIST1H1BP16401 226 aaKnown RBP9.8□□□□□ -0.84
CDH4-202ENST00000611855 COL9A1P20849 921 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 RPS23P62266 143 aaKnown RBP9.8□□□□□ -0.84
CDH4-202ENST00000611855 NKX6-1P78426 367 aaPredicted RBP9.8□□□□□ -0.84
CDH4-202ENST00000611855 ZNF117Q03924 483 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 WDFY1Q8IWB7 410 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 PHOSPHO2Q8TCD6 241 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 PMM1Q92871 262 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 C8orf44Q96CB5 159 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 BMFQ96LC9 184 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 S100A13Q99584 98 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 SLC17A5Q9NRA2 495 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 OR52A1Q9UKL2 312 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 A0A0J9YY10 115 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 ATXN7O15265 892 aaPredicted RBP9.8□□□□□ -0.84
CDH4-202ENST00000611855 SOX15O60248 233 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 MPIG6BO95866 241 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 CD37P11049 281 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 RNH1P13489 461 aaKnown RBP9.8□□□□□ -0.84
CDH4-202ENST00000611855 GLRA1P23415 457 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 PAX6P26367 422 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 RGS19P49795 217 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 MNX1P50219 401 aaPredicted RBP9.8□□□□□ -0.84
CDH4-202ENST00000611855 ASCL1P50553 236 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 FOXL2P58012 376 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 HMGN3Q15651 99 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 SOHLH1Q5JUK2 328 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 KCTD18Q6PI47 426 aaPredicted RBP9.8□□□□□ -0.84
CDH4-202ENST00000611855 YAF2Q8IY57 180 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 PNLDC1Q8NA58 520 aaKnown RBP9.8□□□□□ -0.84
CDH4-202ENST00000611855 SLC37A2Q8TED4 501 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 AQP3Q92482 292 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 CDC6Q99741 560 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 PARP11Q9NR21 331 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 UBQLN4Q9NRR5 601 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 CA14Q9ULX7 337 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 FLVCR1Q9Y5Y0 555 aa9.8□□□□□ -0.84
CDH4-202ENST00000611855 PLRG1O43660 514 aaKnown RBP9.79□□□□□ -0.84
CDH4-202ENST00000611855 SOD3P08294 240 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 VSIG8P0DPA2 414 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 MDKP21741 143 aaPredicted RBP9.79□□□□□ -0.84
CDH4-202ENST00000611855 TMEM33P57088 247 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 IAH1Q2TAA2 248 aaPredicted RBP9.79□□□□□ -0.84
CDH4-202ENST00000611855 KHDC3LQ587J8 217 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 TMEM128Q5BJH2 165 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 OOSP2Q86WS3 158 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 OR5D18Q8NGL1 313 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 ADAT3Q96EY9 351 aaPredicted RBP9.79□□□□□ -0.84
CDH4-202ENST00000611855 PTPRSQ13332 1948 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 A0A0A6YYH2 397 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 IGKV1D-43A0A0B4J1Z2 117 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 A6NJ64 397 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 LDLRAD4O15165 306 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 SOCS1O15524 211 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 CYB5BO43169 146 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 CYTIPO60759 359 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 GLI4P10075 376 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 IGFBP3P17936 291 aaPredicted RBP9.79□□□□□ -0.84
CDH4-202ENST00000611855 SNCAP37840 140 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 LSM6P62312 80 aaKnown RBP9.79□□□□□ -0.84
CDH4-202ENST00000611855 ZNF239Q16600 458 aaKnown RBP9.79□□□□□ -0.84
CDH4-202ENST00000611855 TMEM196Q5HYL7 178 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 TEX30Q5JUR7 227 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 ANGPTL5Q86XS5 388 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.79□□□□□ -0.84
CDH4-202ENST00000611855 ZNF610Q8N9Z0 462 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 HOXB13Q92826 284 aaPredicted RBP9.79□□□□□ -0.84
CDH4-202ENST00000611855 CPNE4Q96A23 557 aaPredicted RBP9.79□□□□□ -0.84
CDH4-202ENST00000611855 RARRES2Q99969 163 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 ST6GALNAC5Q9BVH7 336 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 CFHR5Q9BXR6 569 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 C5orf66Q9H5L9 145 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 CLDN16Q9Y5I7 305 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 TRBV6-7A0A0A0MS04 114 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 ZNF217O75362 1048 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 ZNF205O95201 554 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 CST4P01036 141 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 GNRH1P01148 92 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 TRGC2P03986 189 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 OPN1LWP04000 364 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 HKR1P10072 659 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 TAGLN2P37802 199 aaKnown RBP9.79□□□□□ -0.84
CDH4-202ENST00000611855 EMP2P54851 167 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 OR8G1Q15617 311 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 AKR1C8PQ5T2L2 129 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 ZNF385CQ66K41 422 aaPredicted RBP9.79□□□□□ -0.84
CDH4-202ENST00000611855 OR2T2Q6IF00 324 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 RPUSD3Q6P087 351 aaKnown RBP9.79□□□□□ -0.84
CDH4-202ENST00000611855 SUMF2Q8NBJ7 301 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 OR52N5Q8NH56 324 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 FAM213BQ8TBF2 198 aa9.79□□□□□ -0.84
CDH4-202ENST00000611855 NPRL2Q8WTW4 380 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms