RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 FAM157BP0CG42 384 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 SKP2Q13309 424 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 FAM122BQ7Z309 247 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 ADAD2Q8NCV1 583 aaKnown RBP9.25□□□□□ -0.93
CTCFL-216ENST00000608263 ARHGAP5-AS1Q96IT6 56 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 NICN1Q9BSH3 213 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 CALHM2Q9HA72 323 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 URGCP-MRPS24S4R325 110 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 IGHV3-64DA0A0J9YX35 117 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 TGFBR3LH3BV60 316 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 LRP3O75074 770 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 CPT2P23786 658 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 ZXDAP98168 799 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 INSM1Q01101 510 aaPredicted RBP9.25□□□□□ -0.93
CTCFL-216ENST00000608263 HES3Q5TGS1 186 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 ZNF660Q6AZW8 331 aaPredicted RBP9.25□□□□□ -0.93
CTCFL-216ENST00000608263 FBXW12Q6X9E4 464 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 SLC22A18ASQ8N1D0 253 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 CLRN3Q8NCR9 226 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 OR1L3Q8NH93 324 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 LIN37Q96GY3 246 aaPredicted RBP9.25□□□□□ -0.93
CTCFL-216ENST00000608263 FER1L6-AS2Q96M78 137 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 ZNF2Q9BSG1 426 aaPredicted RBP9.25□□□□□ -0.93
CTCFL-216ENST00000608263 VN1R1Q9GZP7 353 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 PIGLQ9Y2B2 252 aa9.25□□□□□ -0.93
CTCFL-216ENST00000608263 COL4A6Q14031 1691 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 IGKV1D-42A0A075B6H8 117 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 C9orf170A2RU37 121 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 FRG2CA6NGY1 282 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 SOCS1O15524 211 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 ICAM2P13598 275 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 OR2B8PP59922 312 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 RAB2AP61019 212 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 MFAP5Q13361 173 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 NUBPLQ8TB37 319 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 ST7LQ8TDW4 575 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 PTPMT1Q8WUK0 201 aaPredicted RBP9.24□□□□□ -0.93
CTCFL-216ENST00000608263 IL1F10Q8WWZ1 152 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 ROBO4Q8WZ75 1007 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 SGCZQ96LD1 299 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 ANAPC1Q9H1A4 1944 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 RPS10-NUDT3A0A1W2PQS6 291 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 MT-CO3P00414 261 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 SMIM10L1P0DMW3 83 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 NR2C1P13056 603 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 CSF2RBP32927 897 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 RPS10P46783 165 aaKnown RBP9.24□□□□□ -0.93
CTCFL-216ENST00000608263 OR3A4PP47883 348 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 SLC37A1P57057 533 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 ECH1Q13011 328 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 Q6ZRG5 221 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 BEND4Q6ZU67 534 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 EXD3Q8N9H8 876 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 SECTM1Q8WVN6 248 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 SMIM10Q96HG1 83 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 CMTM3Q96MX0 182 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 C12orf57Q99622 126 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 C12orf49Q9H741 205 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 LRFN1Q9P244 771 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 MCTS1Q9ULC4 181 aaKnown RBP9.24□□□□□ -0.93
CTCFL-216ENST00000608263 PHF3Q92576 2039 aaKnown RBP9.24□□□□□ -0.93
CTCFL-216ENST00000608263 HMSDA8MTL9 139 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 S100A2P29034 98 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 RNF4P78317 190 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 RAB32Q13637 225 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 GPR157Q5UAW9 335 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 MYO7BQ6PIF6 2116 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 ATRAIDQ6UW56 229 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 TERB2Q8NHR7 220 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 VWCEQ96DN2 955 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 ZNF845Q96IR2 970 aaPredicted RBP9.24□□□□□ -0.93
CTCFL-216ENST00000608263 KLHDC3Q9BQ90 382 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 ZCCHC4Q9H5U6 513 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 BOKQ9UMX3 212 aaPredicted RBP9.24□□□□□ -0.93
CTCFL-216ENST00000608263 TMEM184BQ9Y519 407 aaPredicted RBP9.24□□□□□ -0.93
CTCFL-216ENST00000608263 GBF1Q92538 1859 aa9.24□□□□□ -0.93
CTCFL-216ENST00000608263 BLACEA4D250 179 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 E9PQ18 207 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 H3BMH7 237 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 MOB3CQ70IA8 216 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 OR5M8Q8NGP6 311 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 SARGQ9BW04 601 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 ZNF71Q9NQZ8 489 aaPredicted RBP9.23□□□□□ -0.93
CTCFL-216ENST00000608263 OCIAD1Q9NX40 245 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 A0A0C4DFX4 3053 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 MKI67P46013 3256 aaKnown RBP9.23□□□□□ -0.93
CTCFL-216ENST00000608263 DOCK7Q96N67 2140 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 CTRB1P17538 263 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 RPS4Y1P22090 263 aaKnown RBP9.23□□□□□ -0.93
CTCFL-216ENST00000608263 SELENOVP59797 346 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 FOXK1P85037 733 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 INPP5JQ15735 1006 aaPredicted RBP9.23□□□□□ -0.93
CTCFL-216ENST00000608263 PCK2Q16822 640 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 RSPO4Q2I0M5 234 aaPredicted RBP9.23□□□□□ -0.93
CTCFL-216ENST00000608263 AVPI1Q5T686 147 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 CTRB2Q6GPI1 263 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 LPCAT3Q6P1A2 487 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 BHLHE23Q8NDY6 225 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 SPTSSAQ969W0 71 aa9.23□□□□□ -0.93
CTCFL-216ENST00000608263 S100PBPQ96BU1 408 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms