RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 ACOD1A6NK06 481 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 M0R1B8 84 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 P2RY10O00398 339 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 TBX1O43435 398 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 F12P00748 615 aaPredicted RBP10.88□□□□□ -0.67
UPF1-208ENST00000600012 TTRP02766 147 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 HLA-DPB1P04440 258 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 CELA3BP08861 270 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 CCL2P13500 99 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 PLP2Q04941 152 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 TRAM1Q15629 374 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 GFOD2Q3B7J2 385 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 ACSM3Q53FZ2 586 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 C1QTNF12Q5T7M4 302 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 FAM27D1Q5T7N8 215 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 PRSS45Q7RTY3 260 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 MYPOPQ86VE0 399 aaPredicted RBP10.88□□□□□ -0.67
UPF1-208ENST00000600012 ELMOD2Q8IZ81 293 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 MS4A15Q8N5U1 240 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 OR51A4Q8NGJ6 313 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 BOD1Q96IK1 185 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 ZNF75AQ96N20 296 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 OR14A2Q96R54 314 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 BEX2Q9BXY8 128 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 ZNF319Q9P2F9 582 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 ATPIF1Q9UII2 106 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 AMDHD2Q9Y303 409 aa10.88□□□□□ -0.67
UPF1-208ENST00000600012 A0A1W2PPK0 400 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 SC5DO75845 299 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 APOC1P02654 83 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 UBCP0CG48 685 aaKnown RBP10.87□□□□□ -0.67
UPF1-208ENST00000600012 COX5BP10606 129 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 HOXB1P14653 301 aaPredicted RBP10.87□□□□□ -0.67
UPF1-208ENST00000600012 ZNF14P17017 642 aaPredicted RBP10.87□□□□□ -0.67
UPF1-208ENST00000600012 ACHEP22303 614 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 CCNOP22674 350 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 STOMP27105 288 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 APLNRP35414 380 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 SOX2P48431 317 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 SERPINB10P48595 397 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 IDH3GP51553 393 aaPredicted RBP10.87□□□□□ -0.67
UPF1-208ENST00000600012 EFNA4P52798 201 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 SNAI3Q3KNW1 292 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 YIF1BQ5BJH7 314 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 ZMAT1Q5H9K5 638 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 CYB5R2Q6BCY4 276 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 DRAM2Q6UX65 266 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 GDPGP1Q6ZNW5 385 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 CEACAM19Q7Z692 300 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 CCDC36Q8IYA8 594 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 C10orf105Q8TEF2 133 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 TSEN15Q8WW01 171 aaKnown RBP10.87□□□□□ -0.67
UPF1-208ENST00000600012 ORAI1Q96D31 301 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 POM121L2Q96KW2 1035 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 SOX7Q9BT81 388 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 DCUN1D5Q9BTE7 237 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 C1QTNF6Q9BXI9 259 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 SHARPINQ9H0F6 387 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 ATP23Q9Y6H3 246 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 PMF1-BGLAPU3KQ54 211 aa10.87□□□□□ -0.67
UPF1-208ENST00000600012 TRBV5-5A0A0J9YX44 114 aa10.86□□□□□ -0.67
UPF1-208ENST00000600012 C5orf49A4QMS7 147 aa10.86□□□□□ -0.67
UPF1-208ENST00000600012 ZNF879B4DU55 563 aa10.86□□□□□ -0.67
UPF1-208ENST00000600012 SLC22A1O15245 554 aa10.86□□□□□ -0.67
UPF1-208ENST00000600012 LMX1BO60663 402 aa10.86□□□□□ -0.67
UPF1-208ENST00000600012 SERPINA3P01011 423 aa10.86□□□□□ -0.67
UPF1-208ENST00000600012 LCATP04180 440 aa10.86□□□□□ -0.67
UPF1-208ENST00000600012 IGHV4-31P0DP07 118 aa10.86□□□□□ -0.67
UPF1-208ENST00000600012 CBR1P16152 277 aa10.86□□□□□ -0.67
UPF1-208ENST00000600012 ZNF16P17020 682 aaPredicted RBP10.86□□□□□ -0.67
UPF1-208ENST00000600012 USF1P22415 310 aaPredicted RBP10.86□□□□□ -0.67
UPF1-208ENST00000600012 FGF9P31371 208 aaPredicted RBP10.86□□□□□ -0.67
UPF1-208ENST00000600012 APOBEC3AP31941 199 aaPredicted RBP10.86□□□□□ -0.67
UPF1-208ENST00000600012 THBS2P35442 1172 aa10.86□□□□□ -0.67
UPF1-208ENST00000600012 COMMD2Q86X83 199 aa10.86□□□□□ -0.67
UPF1-208ENST00000600012 PAQR4Q8N4S7 273 aaPredicted RBP10.86□□□□□ -0.67
UPF1-208ENST00000600012 SLC30A7Q8NEW0 376 aa10.86□□□□□ -0.67
UPF1-208ENST00000600012 OR51E1Q8TCB6 317 aa10.86□□□□□ -0.67
UPF1-208ENST00000600012 GPR148Q8TDV2 347 aa10.86□□□□□ -0.67
UPF1-208ENST00000600012 KCNS3Q9BQ31 491 aa10.86□□□□□ -0.67
UPF1-208ENST00000600012 DCSTAMPQ9H295 470 aa10.86□□□□□ -0.67
UPF1-208ENST00000600012 PPIL3Q9H2H8 161 aaKnown RBP10.86□□□□□ -0.67
UPF1-208ENST00000600012 A0A1B0GTI1 187 aa10.85□□□□□ -0.67
UPF1-208ENST00000600012 A0A1B0GVI7 797 aa10.85□□□□□ -0.67
UPF1-208ENST00000600012 SHISA3A0PJX4 238 aa10.85□□□□□ -0.67
UPF1-208ENST00000600012 SMIM30A4D0T7 59 aa10.85□□□□□ -0.67
UPF1-208ENST00000600012 GATBO75879 557 aaKnown RBP10.85□□□□□ -0.67
UPF1-208ENST00000600012 CDRT1O95170 752 aa10.85□□□□□ -0.67
UPF1-208ENST00000600012 SERPINA5P05154 406 aa10.85□□□□□ -0.67
UPF1-208ENST00000600012 ISG15P05161 165 aa10.85□□□□□ -0.67
UPF1-208ENST00000600012 CLEC2LP0C7M8 214 aa10.85□□□□□ -0.67
UPF1-208ENST00000600012 OCM2P0CE71 109 aa10.85□□□□□ -0.67
UPF1-208ENST00000600012 GALP22466 123 aa10.85□□□□□ -0.67
UPF1-208ENST00000600012 CALRP27797 417 aaKnown RBP10.85□□□□□ -0.67
UPF1-208ENST00000600012 GZMKP49863 264 aa10.85□□□□□ -0.67
UPF1-208ENST00000600012 MXD1Q05195 221 aa10.85□□□□□ -0.67
UPF1-208ENST00000600012 Q499Y3 187 aa10.85□□□□□ -0.67
UPF1-208ENST00000600012 GLYATL3Q5SZD4 288 aa10.85□□□□□ -0.67
UPF1-208ENST00000600012 TMEM244Q5VVB8 128 aa10.85□□□□□ -0.67
UPF1-208ENST00000600012 UNQ9370/PRO34162Q6UXP9 181 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms