RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 J3QW42 95 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 CCRL2O00421 344 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 TMPRSS2O15393 492 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 ABHD16AO95870 558 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 ERCC1P07992 297 aaPredicted RBP13.12□□□□□ -0.31
FOXA3-202ENST00000594297 ADRA2AP08913 450 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 CELP19835 753 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 TUBG1P23258 451 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 PSMA1P25786 263 aaKnown RBP13.12□□□□□ -0.31
FOXA3-202ENST00000594297 PSMB10P40306 273 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 RAD52P43351 418 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 DEFA6Q01524 100 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 SCGB2A2Q13296 93 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 SYT6Q5T7P8 510 aaPredicted RBP13.12□□□□□ -0.31
FOXA3-202ENST00000594297 XAF1Q6GPH4 301 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 MYPOPQ86VE0 399 aaPredicted RBP13.12□□□□□ -0.31
FOXA3-202ENST00000594297 MS4A15Q8N5U1 240 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 ZNF676Q8N7Q3 588 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 UBASH3BQ8TF42 649 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 THRSPQ92748 146 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 MUL1Q969V5 352 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 APOBEC3DQ96AK3 386 aaPredicted RBP13.12□□□□□ -0.31
FOXA3-202ENST00000594297 TMEM186Q96B77 213 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 POM121L2Q96KW2 1035 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 C4orf45Q96LM5 186 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 TPK1Q9H3S4 243 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 DYNLRB1Q9NP97 96 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 BRD7Q9NPI1 651 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 TUBG2Q9NRH3 451 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 ZNF391Q9UJN7 358 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 OR52A1Q9UKL2 312 aa13.12□□□□□ -0.31
FOXA3-202ENST00000594297 ZNF503-AS2A6NEH8 195 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 OGG1O15527 345 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 TBX1O43435 398 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 INMTO95050 263 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 SERPINA3P01011 423 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 IGLV1-44P01699 117 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 CD1AP06126 327 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 ACSM4P0C7M7 580 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 UBCP0CG48 685 aaKnown RBP13.11□□□□□ -0.31
FOXA3-202ENST00000594297 CPEP16870 476 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 ZNF12P17014 697 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 EPHA1P21709 976 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 CFL1P23528 166 aaKnown RBP13.11□□□□□ -0.31
FOXA3-202ENST00000594297 OTX1P32242 354 aaPredicted RBP13.11□□□□□ -0.31
FOXA3-202ENST00000594297 THBS4P35443 961 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 ZNF121P58317 390 aaPredicted RBP13.11□□□□□ -0.31
FOXA3-202ENST00000594297 HGFACQ04756 655 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 TPBGQ13641 420 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 TIMM50Q3ZCQ8 353 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 TMEM244Q5VVB8 128 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 USP43Q70EL4 1123 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 FAM57BQ71RH2 274 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 COMMD2Q86X83 199 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 ZNF485Q8NCK3 441 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 CCDC54Q8NEL0 328 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 NUP37Q8NFH4 326 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 OR2G2Q8NGZ5 317 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 OR5AK2Q8NH90 309 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 CLDND2Q8NHS1 167 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 ITFG2Q969R8 447 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 SMIM19Q96E16 107 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 PBOV1Q9GZY1 135 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 RGCCQ9H4X1 137 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 ZNF442Q9H7R0 627 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 NOX3Q9HBY0 568 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 TBCCD1Q9NVR7 557 aa13.11□□□□□ -0.31
FOXA3-202ENST00000594297 FBXO9Q9UK97 447 aaPredicted RBP13.11□□□□□ -0.31
FOXA3-202ENST00000594297 LOC100509620A0A075B734 347 aa13.1□□□□□ -0.31
FOXA3-202ENST00000594297 PRR32B1ATL7 298 aa13.1□□□□□ -0.31
FOXA3-202ENST00000594297 XRCC2O43543 280 aa13.1□□□□□ -0.31
FOXA3-202ENST00000594297 PLPP2O43688 288 aa13.1□□□□□ -0.31
FOXA3-202ENST00000594297 NOL3O60936 208 aaKnown RBP13.1□□□□□ -0.31
FOXA3-202ENST00000594297 MSMBP08118 114 aa13.1□□□□□ -0.31
FOXA3-202ENST00000594297 CELA3BP08861 270 aa13.1□□□□□ -0.31
FOXA3-202ENST00000594297 SLC3A1Q07837 685 aa13.1□□□□□ -0.31
FOXA3-202ENST00000594297 CDK5R1Q15078 307 aa13.1□□□□□ -0.31
FOXA3-202ENST00000594297 TSTQ16762 297 aaKnown RBP13.1□□□□□ -0.31
FOXA3-202ENST00000594297 KRTAP27-1Q3LI81 207 aa13.1□□□□□ -0.31
FOXA3-202ENST00000594297 LIPKQ5VXJ0 399 aa13.1□□□□□ -0.31
FOXA3-202ENST00000594297 CATSPERDQ86XM0 798 aa13.1□□□□□ -0.31
FOXA3-202ENST00000594297 ZNF584Q8IVC4 421 aa13.1□□□□□ -0.31
FOXA3-202ENST00000594297 SLC7A6Q92536 515 aa13.1□□□□□ -0.31
FOXA3-202ENST00000594297 MS4A3Q96HJ5 214 aa13.1□□□□□ -0.31
FOXA3-202ENST00000594297 BCL2L14Q9BZR8 327 aa13.1□□□□□ -0.31
FOXA3-202ENST00000594297 OPA3Q9H6K4 179 aa13.1□□□□□ -0.31
FOXA3-202ENST00000594297 FAM206AQ9NX38 181 aa13.1□□□□□ -0.31
FOXA3-202ENST00000594297 NUFIP1Q9UHK0 495 aaKnown RBP13.1□□□□□ -0.31
FOXA3-202ENST00000594297 PRKDCP78527 4128 aaKnown RBP13.1□□□□□ -0.31
FOXA3-202ENST00000594297 A0A1B0GVI7 797 aa13.09□□□□□ -0.31
FOXA3-202ENST00000594297 E9PI62 339 aa13.09□□□□□ -0.31
FOXA3-202ENST00000594297 MTRF1O75570 445 aaKnown RBP13.09□□□□□ -0.31
FOXA3-202ENST00000594297 HLA-DPB1P04440 258 aa13.09□□□□□ -0.31
FOXA3-202ENST00000594297 TFAP2AP05549 437 aa13.09□□□□□ -0.31
FOXA3-202ENST00000594297 DBHP09172 617 aa13.09□□□□□ -0.31
FOXA3-202ENST00000594297 GTF2A1P52655 376 aaPredicted RBP13.09□□□□□ -0.31
FOXA3-202ENST00000594297 RPS23P62266 143 aaKnown RBP13.09□□□□□ -0.31
FOXA3-202ENST00000594297 BLMHQ13867 455 aa13.09□□□□□ -0.31
FOXA3-202ENST00000594297 DMKNQ6E0U4 476 aaPredicted RBP13.09□□□□□ -0.31
FOXA3-202ENST00000594297 C1orf229Q6ZS94 237 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms