RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	NR2C1	P13056	603 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	OMG	P23515	440 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	GATA3	P23771	443 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	FPR2	P25090	351 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	SLC3A1	Q07837	685 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	BAMBI	Q13145	260 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	KLHL22	Q53GT1	634 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	RBMS3	Q6XE24	437 aa	Known RBP	11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	DOK3	Q7L591	496 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	STX19	Q8N4C7	294 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	TSPAN14	Q8NG11	270 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	OR52I1	Q8NGK6	324 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	FNDC8	Q8TC99	324 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	EDARADD	Q8WWZ3	215 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	MYDGF	Q969H8	173 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	ZNF747	Q9BV97	191 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	CCDC90B	Q9GZT6	254 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	WDR76	Q9H967	626 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	UNKL	Q9H9P5	680 aa	Known RBP	11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	TNFRSF19	Q9NS68	423 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	CYSLTR2	Q9NS75	346 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	MRPS18A	Q9NVS2	196 aa	Known RBP	11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	NUP50	Q9UKX7	468 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	ZDHHC8	Q9ULC8	765 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	COA3	Q9Y2R0	106 aa	Predicted RBP	11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	STARD10	Q9Y365	291 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	INSIG2	Q9Y5U4	225 aa		11.1	□□□□□ -0.63
NPC1-212	ENST00000591107	PRKDC	P78527	4128 aa	Known RBP	11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	IRGM	A1A4Y4	181 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	TVP23A	A6NH52	213 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107		H0YL77	283 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	SGCE	O43556	437 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	SELENOF	O60613	162 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	HLA-DQA2	P01906	255 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	CDK1	P06493	297 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	HTR1A	P08908	422 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	MDK	P21741	143 aa	Predicted RBP	11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	PRTN3	P24158	256 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	ATP6V1E1	P36543	226 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	NAA10	P41227	235 aa	Predicted RBP	11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	SLC6A9	P48067	706 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	SRSF4	Q08170	494 aa	Known RBP	11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	ST3GAL4	Q11206	333 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	RAB40B	Q12829	278 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	ZMAT1	Q5H9K5	638 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	PRR31	Q5SQ13	230 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	ZNF773	Q6PK81	442 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	KLHL36	Q8N4N3	616 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	SPIC	Q8N5J4	248 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	ZNF283	Q8N7M2	679 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	BHLHE23	Q8NDY6	225 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	C19orf18	Q8NEA5	215 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	TMEM80	Q96HE8	168 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	CNN2	Q99439	309 aa	Known RBP	11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	ELOVL3	Q9HB03	270 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	ADGRL4	Q9HBW9	690 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	FGF20	Q9NP95	211 aa	Predicted RBP	11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	HAO2	Q9NYQ3	351 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	EXOG	Q9Y2C4	368 aa	Known RBP	11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	SNX5	Q9Y5X3	404 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107	COMMD3-BMI1	R4GMX3	469 aa		11.09	□□□□□ -0.63
NPC1-212	ENST00000591107		A0A087WXM4	84 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	C12orf71	A8MTZ7	269 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107		A8MXK9	166 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	ATP6V1B1	P15313	513 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	RPS2	P15880	293 aa	Known RBP	11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	CD80	P33681	288 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	BLVRA	P53004	296 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	PCBD1	P61457	104 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	SCRN3	Q0VDG4	424 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	SLC9A3R2	Q15599	337 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	MEP1B	Q16820	701 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	TMEM155	Q4W5P6	130 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	ESCO2	Q56NI9	601 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	OR2T2	Q6IF00	324 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	PRSS48	Q7RTY5	328 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	ERI1	Q8IV48	349 aa	Known RBP	11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	DIRC2	Q96SL1	478 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	MRI1	Q9BV20	369 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	PLEK2	Q9NYT0	353 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	ASH2L	Q9UBL3	628 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	CGGBP1	Q9UFW8	167 aa	Predicted RBP	11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	OR5V1	Q9UGF6	321 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	DIMT1	Q9UNQ2	313 aa	Known RBP	11.08	□□□□□ -0.64
NPC1-212	ENST00000591107	PPP1R3C	Q9UQK1	317 aa		11.08	□□□□□ -0.64
NPC1-212	ENST00000591107		F5H5P2	479 aa		11.07	□□□□□ -0.64
NPC1-212	ENST00000591107	TMEM178B	H3BS89	294 aa		11.07	□□□□□ -0.64
NPC1-212	ENST00000591107		H3BSA7	217 aa		11.07	□□□□□ -0.64
NPC1-212	ENST00000591107	RER1	O15258	196 aa		11.07	□□□□□ -0.64
NPC1-212	ENST00000591107	MLNR	O43193	412 aa		11.07	□□□□□ -0.64
NPC1-212	ENST00000591107	MRPS14	O60783	128 aa	Known RBP	11.07	□□□□□ -0.64
NPC1-212	ENST00000591107	FADS2	O95864	444 aa	Known RBP	11.07	□□□□□ -0.64
NPC1-212	ENST00000591107	TNFRSF1A	P19438	455 aa		11.07	□□□□□ -0.64
NPC1-212	ENST00000591107	KITLG	P21583	273 aa		11.07	□□□□□ -0.64
NPC1-212	ENST00000591107	TNFSF4	P23510	183 aa		11.07	□□□□□ -0.64
NPC1-212	ENST00000591107	C21orf33	P30042	268 aa	Predicted RBP	11.07	□□□□□ -0.64
NPC1-212	ENST00000591107	LIPA	P38571	399 aa		11.07	□□□□□ -0.64
NPC1-212	ENST00000591107	MAP2K4	P45985	399 aa		11.07	□□□□□ -0.64
NPC1-212	ENST00000591107	FOXL1	Q12952	345 aa		11.07	□□□□□ -0.64
NPC1-212	ENST00000591107	CCDC92	Q53HC0	331 aa	Predicted RBP	11.07	□□□□□ -0.64

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