RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 NOXO1Q8NFA2 376 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 OR9Q2Q8NGE9 314 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 OR8J3Q8NGG0 315 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 OR56A1Q8NGH5 318 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 OR2Y1Q8NGV0 311 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 OR51F2Q8NH61 342 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 SLC37A2Q8TED4 501 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 TMEM170AQ8WVE7 144 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 LCN9Q8WX39 176 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 TMEM234Q8WY98 164 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 RERGQ96A58 199 aaPredicted RBP3.13□□□□□ -1.91
SMG6-208ENST00000570874 APH1AQ96BI3 265 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 TESCQ96BS2 214 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 TM4SF18Q96CE8 201 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 ISOC1Q96CN7 298 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 CXorf40BQ96DE9 158 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 ZHX1-C8orf76Q96EF9 292 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 TSSK2Q96PF2 358 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 MBOAT4Q96T53 435 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 SLC38A3Q99624 504 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 SLC6A7Q99884 636 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 EFCAB11Q9BUY7 163 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 LRRC61Q9BV99 259 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 PTDSS2Q9BVG9 487 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 ELOVL1Q9BW60 279 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 FUNDC2Q9BWH2 189 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 UGT2B28Q9BY64 529 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 LHPPQ9H008 270 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 DUSP15Q9H1R2 295 aaPredicted RBP3.13□□□□□ -1.91
SMG6-208ENST00000570874 ARV1Q9H2C2 271 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 ANKRD19PQ9H560 264 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 MAGIXQ9H6Y5 334 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 CXorf21Q9HAI6 301 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 NMNAT1Q9HAN9 279 aaPredicted RBP3.13□□□□□ -1.91
SMG6-208ENST00000570874 TPT1P8Q9HAU6 139 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 Q9N2K0 584 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 BIN3Q9NQY0 253 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 AGPAT4Q9NRZ5 378 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 STARD5Q9NSY2 213 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 PAK1IP1Q9NWT1 392 aaPredicted RBP3.13□□□□□ -1.91
SMG6-208ENST00000570874 CLN6Q9NWW5 311 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 C1RLQ9NZP8 487 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 ZNF221Q9UK13 617 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 COPS3Q9UNS2 423 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 SLC7A11Q9UPY5 501 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 RNF6Q9Y252 685 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 B3GALT5Q9Y2C3 310 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 POLDIP2Q9Y2S7 368 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 MRPS18CQ9Y3D5 142 aaKnown RBP3.13□□□□□ -1.91
SMG6-208ENST00000570874 UGT2A1Q9Y4X1 527 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 TIMM10BQ9Y5J6 103 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 HEMK1Q9Y5R4 338 aaPredicted RBP3.13□□□□□ -1.91
SMG6-208ENST00000570874 HS3ST3A1Q9Y663 406 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 A3GALT2U3KPV4 340 aa3.13□□□□□ -1.91
SMG6-208ENST00000570874 SDK2Q58EX2 2172 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 A0A0A6YYD5 115 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 SPTY2D1-AS1A0A0U1RR47 76 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 LRIT2A6NDA9 550 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 CCDC182A6NF36 153 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 ZNF860A6NHJ4 632 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 SLC22A20A6NK97 555 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 LRRC30A6NM36 301 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 EFCAB9A8MZ26 197 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 SHISA8B8ZZ34 492 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 C21orf140B9A014 251 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 CLDN25C9JDP6 229 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 FTCDNL1E5RQL4 147 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 PROB1E7EW31 1015 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 G3V2T6 193 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 H3BTX0 84 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 SIRPB1O00241 398 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 CLIC1O00299 241 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 PLPP3O14495 311 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 SOCS2O14508 198 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 TNFSF11O14788 317 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 ERI3O43414 337 aaKnown RBP3.12□□□□□ -1.91
SMG6-208ENST00000570874 XRCC3O43542 346 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 SSNA1O43805 119 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 RAD1O60671 282 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 GCM2O75603 506 aaPredicted RBP3.12□□□□□ -1.91
SMG6-208ENST00000570874 KRT33AO76009 404 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 DIRAS1O95057 198 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 CNIH1O95406 144 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 CBX7O95931 251 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 OPN1SWP03999 348 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 BCHEP06276 602 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 CTSEP14091 401 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 GLB1P16278 677 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 ZNF43P17038 809 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 AKR1C4P17516 323 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 TNFRSF1BP20333 461 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 KITLGP21583 273 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 MATN1P21941 496 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 AADACP22760 399 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 ANOS1P23352 680 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 PSMA1P25786 263 aaKnown RBP3.12□□□□□ -1.91
SMG6-208ENST00000570874 GDF1P27539 372 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 S100GP29377 79 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 CMPK1P30085 196 aa3.12□□□□□ -1.91
SMG6-208ENST00000570874 PPIFP30405 207 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms