RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 XPO6Q96QU8 1125 aaKnown RBP2.12□□□□□ -2.07
CDC27-212ENST00000570818 ACTR3CQ9C0K3 210 aaPredicted RBP2.12□□□□□ -2.07
CDC27-212ENST00000570818 RRP15Q9Y3B9 282 aaKnown RBP2.12□□□□□ -2.07
CDC27-212ENST00000570818 LOXHD1Q8IVV2 1947 aa2.12□□□□□ -2.07
CDC27-212ENST00000570818 TRIM64CA6NLI5 447 aa2.11□□□□□ -2.07
CDC27-212ENST00000570818 C3orf84H3BNL1 204 aa2.11□□□□□ -2.07
CDC27-212ENST00000570818 PGA4P0DJD7 388 aa2.11□□□□□ -2.07
CDC27-212ENST00000570818 PGA3P0DJD8 388 aa2.11□□□□□ -2.07
CDC27-212ENST00000570818 OTX1P32242 354 aaPredicted RBP2.11□□□□□ -2.07
CDC27-212ENST00000570818 GGT2P36268 569 aa2.11□□□□□ -2.07
CDC27-212ENST00000570818 FAM104BQ5XKR9 115 aa2.11□□□□□ -2.07
CDC27-212ENST00000570818 WDR59Q6PJI9 974 aa2.11□□□□□ -2.07
CDC27-212ENST00000570818 SGTBQ96EQ0 304 aa2.11□□□□□ -2.07
CDC27-212ENST00000570818 IGF2BP2-AS1Q96M15 143 aa2.11□□□□□ -2.07
CDC27-212ENST00000570818 SFXN3Q9BWM7 321 aa2.11□□□□□ -2.07
CDC27-212ENST00000570818 KRTAP4-1Q9BYQ7 146 aa2.11□□□□□ -2.07
CDC27-212ENST00000570818 PLEKHF2Q9H8W4 249 aa2.11□□□□□ -2.07
CDC27-212ENST00000570818 AGPAT4Q9NRZ5 378 aa2.11□□□□□ -2.07
CDC27-212ENST00000570818 CLN6Q9NWW5 311 aa2.11□□□□□ -2.07
CDC27-212ENST00000570818 RAB22AQ9UL26 194 aa2.11□□□□□ -2.07
CDC27-212ENST00000570818 ASB3Q9Y575 518 aa2.11□□□□□ -2.07
CDC27-212ENST00000570818 IGLV10-54A0A075B6I4 117 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 NME4O00746 187 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 SLC9A3R1O14745 358 aaPredicted RBP2.1□□□□□ -2.07
CDC27-212ENST00000570818 RNF13O43567 381 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 SYNGR2O43760 224 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 CCDC22O60826 627 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 HMMRO75330 724 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 SNX4O95219 450 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 UQCRFS1P1P0C7P4 283 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 BCKDHBP21953 392 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 BMI1P35226 326 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 FABP6P51161 128 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 Q6ZS52 159 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 OR4C13Q8NGP0 309 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 AKR7LQ8NHP1 331 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 ZNF420Q8TAQ5 688 aaPredicted RBP2.1□□□□□ -2.07
CDC27-212ENST00000570818 GPR21Q99679 349 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 C20orf24Q9BUV8 137 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 NUP58Q9BVL2 599 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 CALN1Q9BXU9 219 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 COMMD3-BMI1R4GMX3 469 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 SORL1Q92673 2214 aa2.1□□□□□ -2.07
CDC27-212ENST00000570818 IGHG2P01859 326 aa2.09□□□□□ -2.07
CDC27-212ENST00000570818 TPBGQ13641 420 aa2.09□□□□□ -2.07
CDC27-212ENST00000570818 SLC9A3R2Q15599 337 aa2.09□□□□□ -2.07
CDC27-212ENST00000570818 ZNF678Q5SXM1 525 aa2.09□□□□□ -2.07
CDC27-212ENST00000570818 MORN3Q6PF18 240 aaPredicted RBP2.09□□□□□ -2.07
CDC27-212ENST00000570818 OR10W1Q8NGF6 305 aa2.09□□□□□ -2.07
CDC27-212ENST00000570818 RASD2Q96D21 266 aa2.09□□□□□ -2.07
CDC27-212ENST00000570818 RAB23Q9ULC3 237 aa2.09□□□□□ -2.07
CDC27-212ENST00000570818 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.09□□□□□ -2.08
CDC27-212ENST00000570818 COL5A3P25940 1745 aaPredicted RBP2.08□□□□□ -2.08
CDC27-212ENST00000570818 CIB2O75838 187 aa2.08□□□□□ -2.08
CDC27-212ENST00000570818 KCNK2O95069 426 aa2.08□□□□□ -2.08
CDC27-212ENST00000570818 CPSF4O95639 269 aaKnown RBP2.08□□□□□ -2.08
CDC27-212ENST00000570818 GTF2E2P29084 291 aaKnown RBP2.08□□□□□ -2.08
CDC27-212ENST00000570818 TAGLN2P37802 199 aaKnown RBP2.08□□□□□ -2.08
CDC27-212ENST00000570818 MYCNOSP40205 109 aa2.08□□□□□ -2.08
CDC27-212ENST00000570818 OR12D2P58182 307 aa2.08□□□□□ -2.08
CDC27-212ENST00000570818 LRRC74AQ0VAA2 488 aa2.08□□□□□ -2.08
CDC27-212ENST00000570818 HADHQ16836 314 aaKnown RBP2.08□□□□□ -2.08
CDC27-212ENST00000570818 CCDC183Q5T5S1 534 aa2.08□□□□□ -2.08
CDC27-212ENST00000570818 TAS2R42Q7RTR8 314 aa2.08□□□□□ -2.08
CDC27-212ENST00000570818 CDH26Q8IXH8 852 aa2.08□□□□□ -2.08
CDC27-212ENST00000570818 RNF10Q8N5U6 811 aaKnown RBP2.08□□□□□ -2.08
CDC27-212ENST00000570818 RPEQ96AT9 228 aa2.08□□□□□ -2.08
CDC27-212ENST00000570818 OTUB2Q96DC9 234 aa2.08□□□□□ -2.08
CDC27-212ENST00000570818 A0A0A6YYD5 115 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 SDHAF1A6NFY7 115 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 ANKRD65E5RJM6 399 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 EIF3HO15372 352 aaKnown RBP eCLIP2.07□□□□□ -2.08
CDC27-212ENST00000570818 SLC16A7O60669 478 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 CCNB2O95067 398 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 TRBV12-3P01733 135 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 TPM2P07951 284 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 THRAP10827 490 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 CBR1P16152 277 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 RAB5AP20339 215 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 KLF3P57682 345 aaPredicted RBP2.07□□□□□ -2.08
CDC27-212ENST00000570818 MAPRE2Q15555 327 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 C6orf99Q4VX62 202 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 MRPL2Q5T653 305 aaKnown RBP2.07□□□□□ -2.08
CDC27-212ENST00000570818 SLC22A9Q8IVM8 553 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 OR4C5Q8NGB2 326 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 SFXN5Q8TD22 340 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 SNF8Q96H20 258 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 TBL1XR1Q9BZK7 514 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 BEX1Q9HBH7 125 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 SAR1BQ9Y6B6 198 aa2.07□□□□□ -2.08
CDC27-212ENST00000570818 COL11A1P12107 1806 aaPredicted RBP2.06□□□□□ -2.08
CDC27-212ENST00000570818 TSPAN11A1L157 253 aa2.06□□□□□ -2.08
CDC27-212ENST00000570818 IZUMO1RA6ND01 250 aa2.06□□□□□ -2.08
CDC27-212ENST00000570818 CCDC169A6NNP5 214 aa2.06□□□□□ -2.08
CDC27-212ENST00000570818 PSPHP1O15172 72 aa2.06□□□□□ -2.08
CDC27-212ENST00000570818 PRSS3P35030 304 aa2.06□□□□□ -2.08
CDC27-212ENST00000570818 KRTAP12-1P59990 96 aa2.06□□□□□ -2.08
CDC27-212ENST00000570818 TRDNQ13061 729 aa2.06□□□□□ -2.08
CDC27-212ENST00000570818 HSDL1Q3SXM5 330 aa2.06□□□□□ -2.08
CDC27-212ENST00000570818 PLIN2Q99541 437 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms