RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 CLVS2Q5SYC1 327 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 FOXB2Q5VYV0 432 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 OR2T2Q6IF00 324 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 CLEC18BQ6UXF7 455 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 TPRA1Q86W33 373 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 CLEC18CQ8NCF0 446 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 NDNFQ8TB73 568 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 TMEM171Q8WVE6 324 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 PIGTQ969N2 578 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 SPOCK3Q9BQ16 436 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 PPIL3Q9H2H8 161 aaKnown RBP9.47□□□□□ -0.89
TMEM260-208ENST00000555905 ZCCHC4Q9H5U6 513 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 RNF167Q9H6Y7 350 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 ZNF442Q9H7R0 627 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 NEK6Q9HC98 313 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 SNTG1Q9NSN8 517 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 TAS2R4Q9NYW5 299 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 KCNN3Q9UGI6 736 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 FZR1Q9UM11 496 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 FOXJ3Q9UPW0 622 aa9.47□□□□□ -0.89
TMEM260-208ENST00000555905 DOPEY1Q5JWR5 2465 aa9.46□□□□□ -0.89
TMEM260-208ENST00000555905 ANKRD61A6NGH8 418 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 IQCF6A8MYZ5 107 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 SHISA9B4DS77 424 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 PIN1P1O15428 100 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 SIAH2O43255 324 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 TIMM8AO60220 97 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-208ENST00000555905 GOSR1O95249 250 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 CST4P01036 141 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 NRASP01111 189 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 ERCC1P07992 297 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-208ENST00000555905 RAB3AP20336 220 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 KITLGP21583 273 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 SDC2P34741 201 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 TNK1Q13470 666 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 DAZAP2Q15038 168 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-208ENST00000555905 MOGQ16653 247 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 TUSC1Q2TAM9 212 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 UTS2BQ765I0 119 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 BHLHE23Q8NDY6 225 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 PIGCQ92535 297 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 ORAI1Q96D31 301 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 TECTBQ96PL2 329 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 PAPOLGQ9BWT3 736 aaKnown RBP9.46□□□□□ -0.9
TMEM260-208ENST00000555905 CHST5Q9GZS9 411 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 DCSTAMPQ9H295 470 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 ABCB9Q9NP78 766 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 MRPL15Q9P015 296 aaKnown RBP9.46□□□□□ -0.9
TMEM260-208ENST00000555905 DUSP13Q9UII6 198 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 PURGQ9UJV8 347 aaKnown RBP9.46□□□□□ -0.9
TMEM260-208ENST00000555905 RHBDD3Q9Y3P4 386 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 CADP27708 2225 aa9.46□□□□□ -0.9
TMEM260-208ENST00000555905 TRAV8-7A0A075B6U6 113 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 A0A1W2PPW3 197 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 MEGF11A6BM72 1044 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 ANXA2P2A6NMY6 339 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 ZNF850A8MQ14 1090 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 MAGEB3O15480 346 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 SULT1B1O43704 296 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 GMDSO60547 372 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 CDRT1O95170 752 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 IL1AP01583 271 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 IGHV3-13P01766 116 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 MAS1P04201 325 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 OR4A8P0C604 315 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 IGFBP3P17936 291 aaPredicted RBP9.45□□□□□ -0.9
TMEM260-208ENST00000555905 TGFBR1P36897 503 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 PSMD7P51665 324 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 MXD1Q05195 221 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 SPCS2Q15005 226 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 CNN3Q15417 329 aaKnown RBP9.45□□□□□ -0.9
TMEM260-208ENST00000555905 ZNF672Q499Z4 452 aaPredicted RBP9.45□□□□□ -0.9
TMEM260-208ENST00000555905 PLCXD3Q63HM9 321 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 TMEM42Q69YG0 159 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 OR5AS1Q8N127 324 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 ACBD4Q8NC06 268 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 OR8G5Q8NG78 346 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 OR1M1Q8NGA1 313 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 OR13C9Q8NGT0 318 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 MRPL24Q96A35 216 aaKnown RBP9.45□□□□□ -0.9
TMEM260-208ENST00000555905 HIST1H2AAQ96QV6 131 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 SYT3Q9BQG1 590 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 TMEM204Q9BSN7 226 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 SLC22A4Q9H015 551 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 TPK1Q9H3S4 243 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 TMEM138Q9NPI0 162 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 GPR173Q9NS66 373 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 GPR160Q9UJ42 338 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 SLC7A11Q9UPY5 501 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 NOP16Q9Y3C1 178 aaKnown RBP9.45□□□□□ -0.9
TMEM260-208ENST00000555905 MPC1Q9Y5U8 109 aa9.45□□□□□ -0.9
TMEM260-208ENST00000555905 USP9XQ93008 2570 aaPredicted RBP9.45□□□□□ -0.9
TMEM260-208ENST00000555905 IGLV3-9A0A075B6K5 115 aa9.44□□□□□ -0.9
TMEM260-208ENST00000555905 PLSCR5A0PG75 271 aa9.44□□□□□ -0.9
TMEM260-208ENST00000555905 A1L4Q6 167 aa9.44□□□□□ -0.9
TMEM260-208ENST00000555905 A6NNC1 897 aa9.44□□□□□ -0.9
TMEM260-208ENST00000555905 E7EQL1 145 aa9.44□□□□□ -0.9
TMEM260-208ENST00000555905 ALX3O95076 343 aa9.44□□□□□ -0.9
TMEM260-208ENST00000555905 HCKP08631 526 aa9.44□□□□□ -0.9
TMEM260-208ENST00000555905 COX6B1P14854 86 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms