RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ACKR3P25106 362 aa13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 MAGEB1P43366 347 aa13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 RANBP1P43487 201 aa13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 PSG7Q13046 419 aa13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 OR2T2Q6IF00 324 aa13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 ADAT3Q96EY9 351 aaPredicted RBP13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 CPNE2Q96FN4 548 aaPredicted RBP13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 TRMT61AQ96FX7 289 aaKnown RBP13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 TMEM204Q9BSN7 226 aa13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 SOX7Q9BT81 388 aa13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 PURGQ9UJV8 347 aaKnown RBP13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 MPC1Q9Y5U8 109 aa13.59□□□□□ -0.23
TRAFD1-203ENST00000547063 IGLV3-9A0A075B6K5 115 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 A0A1W2PPK0 400 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 PIN1P1O15428 100 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 MAGEB3O15480 346 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 SULT1B1O43704 296 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 TIMM8AO60220 97 aaPredicted RBP13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 NRASP01111 189 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 IL1AP01583 271 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 RNF224P0DH78 156 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 MPV17P39210 176 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 EVX1P49640 407 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 NCS1P62166 190 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 TNK1Q13470 666 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 CNN3Q15417 329 aaKnown RBP13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 FAM27D1Q5T7N8 215 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 TMEM42Q69YG0 159 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 VHLLQ6RSH7 139 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 CROCCP3Q8IVE0 287 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 NKAIN3Q8N8D7 197 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 OR8G5Q8NG78 346 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 MRPL24Q96A35 216 aaKnown RBP13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 HIST1H2AAQ96QV6 131 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 PAPOLGQ9BWT3 736 aaKnown RBP13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 TMEM138Q9NPI0 162 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 CYSLTR2Q9NS75 346 aa13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 SMG1Q96Q15 3661 aaKnown RBP13.58□□□□□ -0.24
TRAFD1-203ENST00000547063 USP9XQ93008 2570 aaPredicted RBP13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 ANXA2P2A6NMY6 339 aa13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 A6NNC1 897 aa13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 LMX1BO60663 402 aa13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 IGFBP3P17936 291 aaPredicted RBP13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 PRKACBP22694 351 aa13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 APOBEC3AP31941 199 aaPredicted RBP13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 SERPINB10P48595 397 aa13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 ZNF672Q499Z4 452 aaPredicted RBP13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 OR1M1Q8NGA1 313 aa13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 PIGCQ92535 297 aa13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 DHRS9Q9BPW9 319 aa13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 DCSTAMPQ9H295 470 aa13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 PPIL3Q9H2H8 161 aaKnown RBP13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 TAS2R4Q9NYW5 299 aa13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 DUSP13Q9UII6 198 aa13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 FBXO9Q9UK97 447 aaPredicted RBP13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 SLC7A11Q9UPY5 501 aa13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 RHBDD3Q9Y3P4 386 aa13.57□□□□□ -0.24
TRAFD1-203ENST00000547063 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 PLSCR5A0PG75 271 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 SIAH2O43255 324 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 GMDSO60547 372 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 TMEM127O75204 238 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 CDRT1O95170 752 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 OR4A8P0C604 315 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 RAB3BP20337 219 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 LOXP28300 417 aaPredicted RBP13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 BDKRB2P30411 391 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 SDC2P34741 201 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 MZT1Q08AG7 82 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 ADIPOQQ15848 244 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 GLT8D1Q68CQ7 371 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 ZNF529Q6P280 563 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 CDH26Q8IXH8 852 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 ZDHHC23Q8IYP9 409 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 SPERTQ8NA61 448 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 BHLHE23Q8NDY6 225 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 OR13C9Q8NGT0 318 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 OR13G1Q8NGZ3 307 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 SPSB1Q96BD6 273 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 FOXRED1Q96CU9 486 aaPredicted RBP13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 PLK3Q9H4B4 646 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 RNF167Q9H6Y7 350 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 TMEM100Q9NV29 134 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 FAIMQ9NVQ4 179 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 CISD1Q9NZ45 108 aaKnown RBP13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 FLNCQ14315 2725 aa13.56□□□□□ -0.24
TRAFD1-203ENST00000547063 TRAV8-7A0A075B6U6 113 aa13.55□□□□□ -0.24
TRAFD1-203ENST00000547063 A0A1W2PPW3 197 aa13.55□□□□□ -0.24
TRAFD1-203ENST00000547063 A6NIN4 97 aa13.55□□□□□ -0.24
TRAFD1-203ENST00000547063 E7EQL1 145 aa13.55□□□□□ -0.24
TRAFD1-203ENST00000547063 MAS1P04201 325 aa13.55□□□□□ -0.24
TRAFD1-203ENST00000547063 ALDOBP05062 364 aa13.55□□□□□ -0.24
TRAFD1-203ENST00000547063 COX6B1P14854 86 aa13.55□□□□□ -0.24
TRAFD1-203ENST00000547063 ATF1P18846 271 aa13.55□□□□□ -0.24
TRAFD1-203ENST00000547063 SOX6P35712 828 aa13.55□□□□□ -0.24
TRAFD1-203ENST00000547063 SERPINF1P36955 418 aa13.55□□□□□ -0.24
TRAFD1-203ENST00000547063 PRSS12P56730 875 aa13.55□□□□□ -0.24
TRAFD1-203ENST00000547063 PRDX4Q13162 271 aa13.55□□□□□ -0.24
TRAFD1-203ENST00000547063 FOXB2Q5VYV0 432 aa13.55□□□□□ -0.24
TRAFD1-203ENST00000547063 PLCXD3Q63HM9 321 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms