RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 PIGLQ9Y2B2 252 aa13.84□□□□□ -0.19
LIMS2-217ENST00000545738 F5H5P2 479 aa13.83□□□□□ -0.2
LIMS2-217ENST00000545738 MRPS14O60783 128 aaKnown RBP13.83□□□□□ -0.2
LIMS2-217ENST00000545738 IGHV4-39P01824 125 aa13.83□□□□□ -0.2
LIMS2-217ENST00000545738 HPXP02790 462 aa13.83□□□□□ -0.2
LIMS2-217ENST00000545738 CFL1P23528 166 aaKnown RBP13.83□□□□□ -0.2
LIMS2-217ENST00000545738 CCL8P80075 99 aa13.83□□□□□ -0.2
LIMS2-217ENST00000545738 MAB21L1Q13394 359 aa13.83□□□□□ -0.2
LIMS2-217ENST00000545738 SSX1Q16384 188 aa13.83□□□□□ -0.2
LIMS2-217ENST00000545738 LIPKQ5VXJ0 399 aa13.83□□□□□ -0.2
LIMS2-217ENST00000545738 KRT74Q7RTS7 529 aa13.83□□□□□ -0.2
LIMS2-217ENST00000545738 SEMA6DQ8NFY4 1073 aa13.83□□□□□ -0.2
LIMS2-217ENST00000545738 OR2Z1Q8NG97 314 aa13.83□□□□□ -0.2
LIMS2-217ENST00000545738 ORAI1Q96D31 301 aa13.83□□□□□ -0.2
LIMS2-217ENST00000545738 MGLLQ99685 303 aa13.83□□□□□ -0.2
LIMS2-217ENST00000545738 MRPL15Q9P015 296 aaKnown RBP13.83□□□□□ -0.2
LIMS2-217ENST00000545738 PRRC2AP48634 2157 aaKnown RBP13.83□□□□□ -0.2
LIMS2-217ENST00000545738 SVEP1Q4LDE5 3571 aa13.82□□□□□ -0.2
LIMS2-217ENST00000545738 A0A1B0GVI7 797 aa13.82□□□□□ -0.2
LIMS2-217ENST00000545738 PLSCR5A0PG75 271 aa13.82□□□□□ -0.2
LIMS2-217ENST00000545738 TRIM64CA6NLI5 447 aa13.82□□□□□ -0.2
LIMS2-217ENST00000545738 ACHEP22303 614 aa13.82□□□□□ -0.2
LIMS2-217ENST00000545738 BDH1Q02338 343 aa13.82□□□□□ -0.2
LIMS2-217ENST00000545738 TSTQ16762 297 aaKnown RBP13.82□□□□□ -0.2
LIMS2-217ENST00000545738 TMEM244Q5VVB8 128 aa13.82□□□□□ -0.2
LIMS2-217ENST00000545738 UBE2UQ5VVX9 321 aa13.82□□□□□ -0.2
LIMS2-217ENST00000545738 TMEM42Q69YG0 159 aa13.82□□□□□ -0.2
LIMS2-217ENST00000545738 WDR86Q86TI4 376 aa13.82□□□□□ -0.2
LIMS2-217ENST00000545738 CDH24Q86UP0 819 aa13.82□□□□□ -0.2
LIMS2-217ENST00000545738 TSPAN14Q8NG11 270 aa13.82□□□□□ -0.2
LIMS2-217ENST00000545738 ITPKCQ96DU7 683 aa13.82□□□□□ -0.2
LIMS2-217ENST00000545738 PERPQ96FX8 193 aa13.82□□□□□ -0.2
LIMS2-217ENST00000545738 PAPOLGQ9BWT3 736 aaKnown RBP13.82□□□□□ -0.2
LIMS2-217ENST00000545738 LOC100289279A0A1B0GTE1 492 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 ANKRD61A6NGH8 418 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 ZNF850A8MQ14 1090 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 ADH4P08319 380 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 ATP6V1B1P15313 513 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 DDOSTP39656 456 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 MAP2K3P46734 347 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 PTH2RP49190 550 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 HOXA4Q00056 320 aaPredicted RBP13.81□□□□□ -0.2
LIMS2-217ENST00000545738 MLLT11Q13015 90 aaPredicted RBP13.81□□□□□ -0.2
LIMS2-217ENST00000545738 DEFB113Q30KQ7 82 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 CEP78Q5JTW2 689 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 KCTD8Q6ZWB6 473 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 ZNF367Q7RTV3 350 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 KRTAP1-3Q8IUG1 177 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 HAVCR2Q8TDQ0 301 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 PIGTQ969N2 578 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 ELMOD3Q96FG2 381 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 NR1H4Q96RI1 486 aaPredicted RBP13.81□□□□□ -0.2
LIMS2-217ENST00000545738 TMEM100Q9NV29 134 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 HHLA2Q9UM44 414 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 SF3B6Q9Y3B4 125 aaKnown RBP13.81□□□□□ -0.2
LIMS2-217ENST00000545738 CACNG2Q9Y698 323 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 TANC2Q9HCD6 1990 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 LYNX1G3V0Z9 82 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 CST4P01036 141 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 LYNX1P0DP58 116 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 PAX1P15863 534 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 THBS2P35442 1172 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 LIPAP38571 399 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 SOX2P48431 317 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 GP2P55259 537 aaKnown RBP13.81□□□□□ -0.2
LIMS2-217ENST00000545738 TAS2R43P59537 309 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 RPS25P62851 125 aaKnown RBP13.81□□□□□ -0.2
LIMS2-217ENST00000545738 RIPPLY1Q0D2K3 151 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 PRDX4Q13162 271 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 TPBGQ13641 420 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 NEDD8Q15843 81 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 RNF144BQ7Z419 303 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 PHC2Q8IXK0 858 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 OR13G1Q8NGZ3 307 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 PIGCQ92535 297 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 FGGYQ96C11 551 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 ADAT1Q9BUB4 502 aaKnown RBP13.81□□□□□ -0.2
LIMS2-217ENST00000545738 COMMD4Q9H0A8 199 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 MS4A5Q9H3V2 200 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 ZNF275Q9NSD4 429 aaPredicted RBP13.81□□□□□ -0.2
LIMS2-217ENST00000545738 DCAF16Q9NXF7 216 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 ZNF281Q9Y2X9 895 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 PMF1-BGLAPU3KQ54 211 aa13.81□□□□□ -0.2
LIMS2-217ENST00000545738 IGKV1-9A0A0C4DH69 117 aa13.8□□□□□ -0.2
LIMS2-217ENST00000545738 TRBV5-5A0A0J9YX44 114 aa13.8□□□□□ -0.2
LIMS2-217ENST00000545738 ZNF816-ZNF321PA0A0X1KG74 233 aa13.8□□□□□ -0.2
LIMS2-217ENST00000545738 GMDSO60547 372 aa13.8□□□□□ -0.2
LIMS2-217ENST00000545738 CPEP16870 476 aa13.8□□□□□ -0.2
LIMS2-217ENST00000545738 UBE2V2Q15819 145 aa13.8□□□□□ -0.2
LIMS2-217ENST00000545738 ARMCX4Q5H9R4 360 aa13.8□□□□□ -0.2
LIMS2-217ENST00000545738 SVOPQ8N4V2 548 aa13.8□□□□□ -0.2
LIMS2-217ENST00000545738 CSNK2A3Q8NEV1 391 aa13.8□□□□□ -0.2
LIMS2-217ENST00000545738 MBD6Q96DN6 1003 aa13.8□□□□□ -0.2
LIMS2-217ENST00000545738 OR2V2Q96R30 315 aa13.8□□□□□ -0.2
LIMS2-217ENST00000545738 OR14A2Q96R54 314 aa13.8□□□□□ -0.2
LIMS2-217ENST00000545738 GSX2Q9BZM3 304 aa13.8□□□□□ -0.2
LIMS2-217ENST00000545738 PPIL3Q9H2H8 161 aaKnown RBP13.8□□□□□ -0.2
LIMS2-217ENST00000545738 GPR173Q9NS66 373 aa13.8□□□□□ -0.2
LIMS2-217ENST00000545738 CYSLTR2Q9NS75 346 aa13.8□□□□□ -0.2
LIMS2-217ENST00000545738 TREM2Q9NZC2 230 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms