RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 SHISA3A0PJX4 238 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 ICMTO60725 284 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 NCR1O76036 304 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 RAF1P04049 648 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 MAS1P04201 325 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 PRF1P14222 555 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 FSTP19883 344 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 ACKR3P25106 362 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 GCH1P30793 250 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 MPV17P39210 176 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 RPS23P62266 143 aaKnown RBP12.16□□□□□ -0.46
CD4-208ENST00000538827 RIPPLY1Q0D2K3 151 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 HNRNPA0Q13151 305 aaKnown RBP12.16□□□□□ -0.46
CD4-208ENST00000538827 OR2T2Q6IF00 324 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 OR5AS1Q8N127 324 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 PLPP7Q8NBV4 271 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 BHLHE23Q8NDY6 225 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 CMBLQ96DG6 245 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 POM121Q96HA1 1249 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 TPK1Q9H3S4 243 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 GPR173Q9NS66 373 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 MED13LQ71F56 2210 aa12.16□□□□□ -0.46
CD4-208ENST00000538827 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.15□□□□□ -0.46
CD4-208ENST00000538827 ANXA2P2A6NMY6 339 aa12.15□□□□□ -0.46
CD4-208ENST00000538827 C19orf84I3L1E1 186 aa12.15□□□□□ -0.46
CD4-208ENST00000538827 PDCD5O14737 125 aa12.15□□□□□ -0.46
CD4-208ENST00000538827 CD3EP07766 207 aa12.15□□□□□ -0.46
CD4-208ENST00000538827 ZNF182P17025 639 aaPredicted RBP12.15□□□□□ -0.46
CD4-208ENST00000538827 RAB3BP20337 219 aa12.15□□□□□ -0.46
CD4-208ENST00000538827 KIR2DL3P43628 341 aa12.15□□□□□ -0.46
CD4-208ENST00000538827 CAV3P56539 151 aa12.15□□□□□ -0.46
CD4-208ENST00000538827 OR10A3P58181 314 aa12.15□□□□□ -0.46
CD4-208ENST00000538827 OR8B8Q15620 311 aa12.15□□□□□ -0.46
CD4-208ENST00000538827 BEX5Q5H9J7 111 aa12.15□□□□□ -0.46
CD4-208ENST00000538827 NCMAPQ5T1S8 102 aa12.15□□□□□ -0.46
CD4-208ENST00000538827 SERPINA12Q8IW75 414 aa12.15□□□□□ -0.46
CD4-208ENST00000538827 OR1M1Q8NGA1 313 aa12.15□□□□□ -0.46
CD4-208ENST00000538827 NPRL2Q8WTW4 380 aa12.15□□□□□ -0.46
CD4-208ENST00000538827 PIGCQ92535 297 aa12.15□□□□□ -0.46
CD4-208ENST00000538827 PIK3IP1Q96FE7 263 aa12.15□□□□□ -0.46
CD4-208ENST00000538827 PAPOLGQ9BWT3 736 aaKnown RBP12.15□□□□□ -0.46
CD4-208ENST00000538827 KCNN3Q9UGI6 736 aa12.15□□□□□ -0.46
CD4-208ENST00000538827 AK6Q9Y3D8 172 aaKnown RBP12.15□□□□□ -0.46
CD4-208ENST00000538827 TRAV1-2A0A0B4J238 106 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 ZNF816-ZNF321PA0A0X1KG74 233 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 DHRS7CA6NNS2 312 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 ANKRD30BLA7E2S9 258 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 CD300LBA8K4G0 201 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 TIMM8AO60220 97 aaPredicted RBP12.14□□□□□ -0.47
CD4-208ENST00000538827 IL1AP01583 271 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 HCKP08631 526 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 SELEP16581 610 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 SRMP19623 302 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 RAB3AP20336 220 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 SOX6P35712 828 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 RPS19P39019 145 aaKnown RBP12.14□□□□□ -0.47
CD4-208ENST00000538827 TNK1Q13470 666 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 ZNF718Q3SXZ3 478 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 PLCXD3Q63HM9 321 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 ASPHD2Q6ICH7 369 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 FBXW12Q6X9E4 464 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 PARP16Q8N5Y8 322 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 DNAAF1Q8NEP3 725 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 OR51A2Q8NGJ7 313 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 TRMT10AQ8TBZ6 339 aaKnown RBP12.14□□□□□ -0.47
CD4-208ENST00000538827 KLF14Q8TD94 323 aaPredicted RBP12.14□□□□□ -0.47
CD4-208ENST00000538827 PIGTQ969N2 578 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 MARS2Q96GW9 593 aaKnown RBP12.14□□□□□ -0.47
CD4-208ENST00000538827 DACH2Q96NX9 599 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 REPIN1Q9BWE0 567 aaKnown RBP12.14□□□□□ -0.47
CD4-208ENST00000538827 CHST5Q9GZS9 411 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 ZCCHC4Q9H5U6 513 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 CRIM1Q9NZV1 1036 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 CCDC59Q9P031 241 aaKnown RBP12.14□□□□□ -0.47
CD4-208ENST00000538827 GPR160Q9UJ42 338 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 FOXJ3Q9UPW0 622 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 CCDC168Q8NDH2 2452 aa12.14□□□□□ -0.47
CD4-208ENST00000538827 ZNF850A8MQ14 1090 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 SULT1B1O43704 296 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 RAC2P15153 192 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 IGFBP3P17936 291 aaPredicted RBP12.13□□□□□ -0.47
CD4-208ENST00000538827 DDOSTP39656 456 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 PEX19P40855 299 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 FABP6P51161 128 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 PRDX4Q13162 271 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 CNN3Q15417 329 aaKnown RBP12.13□□□□□ -0.47
CD4-208ENST00000538827 DGUOKQ16854 277 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 DMRTC1Q5HYR2 192 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 CLVS2Q5SYC1 327 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 DDI2Q5TDH0 399 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 Q6ZSR3 168 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 MOB3CQ70IA8 216 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 LRRTM1Q86UE6 522 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 TPRA1Q86W33 373 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 FTMTQ8N4E7 242 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 CSNK2A3Q8NEV1 391 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 OR5D14Q8NGL3 314 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 DYNC2LI1Q8TCX1 351 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 PP6455Q8WZ26 134 aa12.13□□□□□ -0.47
CD4-208ENST00000538827 DVL3Q92997 716 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms