RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 YIPF5Q969M3 257 aa9.62□□□□□ -0.87
HTT-213ENST00000513806 PIGTQ969N2 578 aa9.62□□□□□ -0.87
HTT-213ENST00000513806 FGGYQ96C11 551 aa9.62□□□□□ -0.87
HTT-213ENST00000513806 ADAT3Q96EY9 351 aaPredicted RBP9.62□□□□□ -0.87
HTT-213ENST00000513806 PGLYRP3Q96LB9 341 aa9.62□□□□□ -0.87
HTT-213ENST00000513806 OPALINQ96PE5 141 aa9.62□□□□□ -0.87
HTT-213ENST00000513806 PAPOLGQ9BWT3 736 aaKnown RBP9.62□□□□□ -0.87
HTT-213ENST00000513806 TRIM36Q9NQ86 728 aa9.62□□□□□ -0.87
HTT-213ENST00000513806 TUBG2Q9NRH3 451 aa9.62□□□□□ -0.87
HTT-213ENST00000513806 TMEM100Q9NV29 134 aa9.62□□□□□ -0.87
HTT-213ENST00000513806 A0A1W2PPK0 400 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 ANKRD30BLA7E2S9 258 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 H7C417 338 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 DHRS3O75911 302 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 UBCP0CG48 685 aaKnown RBP9.61□□□□□ -0.87
HTT-213ENST00000513806 ATP6V1B1P15313 513 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 ACHEP22303 614 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 CCL1P22362 96 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 THBS2P35442 1172 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 MAP2K3P46734 347 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 RPS25P62851 125 aaKnown RBP9.61□□□□□ -0.87
HTT-213ENST00000513806 TNFAIP6P98066 277 aaPredicted RBP9.61□□□□□ -0.87
HTT-213ENST00000513806 MAB21L1Q13394 359 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 NEDD8Q15843 81 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 KCTD21Q4G0X4 260 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 TMEM244Q5VVB8 128 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 LIPKQ5VXJ0 399 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 ZNF773Q6PK81 442 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 RNF144BQ7Z419 303 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 WDR86Q86TI4 376 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 KRTAP1-3Q8IUG1 177 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 ZNF525Q8N782 197 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 OR13C3Q8NGS6 347 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 OR13G1Q8NGZ3 307 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 ZNF420Q8TAQ5 688 aaPredicted RBP9.61□□□□□ -0.87
HTT-213ENST00000513806 TSEN15Q8WW01 171 aaKnown RBP9.61□□□□□ -0.87
HTT-213ENST00000513806 HPSE2Q8WWQ2 592 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 SMIM19Q96E16 107 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 OR2V2Q96R30 315 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 NKX3-1Q99801 234 aaPredicted RBP9.61□□□□□ -0.87
HTT-213ENST00000513806 TMED9Q9BVK6 235 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 YTHDF1Q9BYJ9 559 aaKnown RBP9.61□□□□□ -0.87
HTT-213ENST00000513806 RGCCQ9H4X1 137 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 OPA3Q9H6K4 179 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 UFSP2Q9NUQ7 469 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 ZNF701Q9NV72 531 aaPredicted RBP9.61□□□□□ -0.87
HTT-213ENST00000513806 MYO9AB2RTY4 2548 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 CR1P17927 2039 aa9.61□□□□□ -0.87
HTT-213ENST00000513806 ZNF816-ZNF321PA0A0X1KG74 233 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 LOC100289279A0A1B0GTE1 492 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 TRIM64A6NGJ6 449 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 TMEM212A6NML5 194 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 INMTO95050 263 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 ISG15P05161 165 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 GRPP07492 148 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 CFL1P23528 166 aaKnown RBP9.6□□□□□ -0.87
HTT-213ENST00000513806 ART1P52961 327 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 RPS11P62280 158 aaKnown RBP eCLIP9.6□□□□□ -0.87
HTT-213ENST00000513806 RIPPLY1Q0D2K3 151 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 MPPED2Q15777 294 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 TBCEQ15813 527 aaPredicted RBP9.6□□□□□ -0.87
HTT-213ENST00000513806 MOGQ16653 247 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 Q6ZSR3 168 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 KCTD8Q6ZWB6 473 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 TRMT10AQ8TBZ6 339 aaKnown RBP9.6□□□□□ -0.87
HTT-213ENST00000513806 UBASH3BQ8TF42 649 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 TMEM203Q969S6 136 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 MEGF10Q96KG7 1140 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 MYCBPQ99417 103 aaPredicted RBP9.6□□□□□ -0.87
HTT-213ENST00000513806 COMMD4Q9H0A8 199 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 RAB1BQ9H0U4 201 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 MS4A5Q9H3V2 200 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 DECR2Q9NUI1 292 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 BEX4Q9NWD9 120 aaPredicted RBP9.6□□□□□ -0.87
HTT-213ENST00000513806 MRPL15Q9P015 296 aaKnown RBP9.6□□□□□ -0.87
HTT-213ENST00000513806 HHLA2Q9UM44 414 aa9.6□□□□□ -0.87
HTT-213ENST00000513806 YLPM1P49750 1951 aaKnown RBP9.59□□□□□ -0.87
HTT-213ENST00000513806 GMDSO60547 372 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 MTRF1O75570 445 aaKnown RBP9.59□□□□□ -0.87
HTT-213ENST00000513806 ZNF205O95201 554 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 TNFAIP8O95379 198 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 F12P00748 615 aaPredicted RBP9.59□□□□□ -0.87
HTT-213ENST00000513806 CST4P01036 141 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 RPSAP08865 295 aaKnown RBP9.59□□□□□ -0.87
HTT-213ENST00000513806 SMIM18P0DKX4 95 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 BMP4P12644 408 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 DAOP14920 347 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 PSMB9P28065 219 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 GNALP38405 381 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 DDOSTP39656 456 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 PMELP40967 661 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 MRPL28Q13084 256 aaKnown RBP9.59□□□□□ -0.87
HTT-213ENST00000513806 UBE2V2Q15819 145 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 SSX1Q16384 188 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 CCDC58Q4VC31 144 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 ARMCX4Q5H9R4 360 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 FAM27D1Q5T7N8 215 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 PLCXD3Q63HM9 321 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 ASPHD2Q6ICH7 369 aa9.59□□□□□ -0.87
HTT-213ENST00000513806 ZNF826PQ6ZT77 177 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms