RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	MSMP	Q1L6U9	139 aa		10.43	□□□□□ -0.74
MATR3-231	ENST00000502394	NCMAP	Q5T1S8	102 aa		10.43	□□□□□ -0.74
MATR3-231	ENST00000502394	CRIP3	Q6Q6R5	217 aa		10.43	□□□□□ -0.74
MATR3-231	ENST00000502394	TMEM108	Q6UXF1	575 aa		10.43	□□□□□ -0.74
MATR3-231	ENST00000502394	PGAP1	Q75T13	922 aa		10.43	□□□□□ -0.74
MATR3-231	ENST00000502394	MRPL21	Q7Z2W9	205 aa	Known RBP	10.43	□□□□□ -0.74
MATR3-231	ENST00000502394	OR56B2P	Q8NGI1	322 aa		10.43	□□□□□ -0.74
MATR3-231	ENST00000502394	OR1J1	Q8NGS3	322 aa		10.43	□□□□□ -0.74
MATR3-231	ENST00000502394	LINC01560	Q8TB33	94 aa		10.43	□□□□□ -0.74
MATR3-231	ENST00000502394	PP6455	Q8WZ26	134 aa		10.43	□□□□□ -0.74
MATR3-231	ENST00000502394	ZC3HAV1L	Q96H79	300 aa	Known RBP	10.43	□□□□□ -0.74
MATR3-231	ENST00000502394	OR2J1	Q9GZK6	312 aa		10.43	□□□□□ -0.74
MATR3-231	ENST00000502394	OR51B6	Q9H340	312 aa		10.43	□□□□□ -0.74
MATR3-231	ENST00000502394	TCF7L1	Q9HCS4	588 aa		10.43	□□□□□ -0.74
MATR3-231	ENST00000502394	PIGL	Q9Y2B2	252 aa		10.43	□□□□□ -0.74
MATR3-231	ENST00000502394	A3GALT2	U3KPV4	340 aa		10.43	□□□□□ -0.74
MATR3-231	ENST00000502394	SMIM30	A4D0T7	59 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394		A6NIN4	97 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	CD300LB	A8K4G0	201 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	NOTO	A8MTQ0	251 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	IQCF6	A8MYZ5	107 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	ATP6V1G2-DDX39B	F2Z307	99 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	PDCD5	O14737	125 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	NCR1	O76036	304 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	PRF1	P14222	555 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	ZNF20	P17024	532 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	THBS2	P35442	1172 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	GLRX	P35754	106 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	MPV17	P39210	176 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	SRSF1	Q07955	248 aa	Known RBP eCLIP	10.42	□□□□□ -0.74	6e-8	■■□□□ 11.4
MATR3-231	ENST00000502394	HNRNPA0	Q13151	305 aa	Known RBP	10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	DGUOK	Q16854	277 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	SPATA46	Q5T0L3	261 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	MBNL2	Q5VZF2	373 aa	Known RBP	10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	FAM166A	Q6J272	317 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	UNQ6126/PRO20091	Q6UXV3	157 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	ACBD4	Q8NC06	268 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	NUP37	Q8NFH4	326 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	OR1M1	Q8NGA1	313 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	OR5D14	Q8NGL3	314 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	OR13C9	Q8NGT0	318 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	KLF14	Q8TD94	323 aa	Predicted RBP	10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	PIGT	Q969N2	578 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	HAVCR1	Q96D42	359 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	CMBL	Q96DG6	245 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	SLITRK2	Q9H156	845 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	PLEKHA1	Q9HB21	404 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	NGB	Q9NPG2	151 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	NDRG3	Q9UGV2	375 aa		10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	AK6	Q9Y3D8	172 aa	Known RBP	10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	ANKHD1	Q8IWZ3	2542 aa	Known RBP	10.42	□□□□□ -0.74
MATR3-231	ENST00000502394	SPTBN1	Q01082	2364 aa	Known RBP	10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	CHD6	Q8TD26	2715 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394		A0A075B6Q4	140 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	ZNF816-ZNF321P	A0A0X1KG74	233 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394		A0A1B0GWJ7	208 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	MEGF11	A6BM72	1044 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	SULT1B1	O43704	296 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	CST4	P01036	141 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	MAS1	P04201	325 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	ALDOB	P05062	364 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	RNF224	P0DH78	156 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	ZNF250	P15622	560 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	ATF1	P18846	271 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	KITLG	P21583	273 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	GNAL	P38405	381 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	RORC	P51449	518 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	BSPH1	Q075Z2	132 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	PSG7	Q13046	419 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	SNTB2	Q13425	540 aa	Known RBP	10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	SNTB1	Q13884	538 aa	Known RBP	10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	UBE2V2	Q15819	145 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	CLVS2	Q5SYC1	327 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	ALKBH2	Q6NS38	261 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	SFXN4	Q6P4A7	337 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	CDH26	Q8IXH8	852 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	CSNK2A3	Q8NEV1	391 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	TMEM171	Q8WVE6	324 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	FGF23	Q9GZV9	251 aa	Predicted RBP	10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	TPK1	Q9H3S4	243 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	CKLF	Q9UBR5	152 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	RALY	Q9UKM9	306 aa	Known RBP	10.41	□□□□□ -0.74
MATR3-231	ENST00000502394		V9GY05	133 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	ADGRG4	Q8IZF6	3080 aa		10.41	□□□□□ -0.74
MATR3-231	ENST00000502394	DOPEY1	Q5JWR5	2465 aa		10.4	□□□□□ -0.74
MATR3-231	ENST00000502394	IGLV3-9	A0A075B6K5	115 aa		10.4	□□□□□ -0.74
MATR3-231	ENST00000502394	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	10.4	□□□□□ -0.74
MATR3-231	ENST00000502394	CLEC18A	A5D8T8	446 aa		10.4	□□□□□ -0.74
MATR3-231	ENST00000502394	GGT3P	A6NGU5	568 aa		10.4	□□□□□ -0.74
MATR3-231	ENST00000502394	TUBAL3	A6NHL2	446 aa		10.4	□□□□□ -0.74
MATR3-231	ENST00000502394	IFITM5	A6NNB3	132 aa		10.4	□□□□□ -0.74
MATR3-231	ENST00000502394	DEFB108A	A8MXU0	73 aa		10.4	□□□□□ -0.74
MATR3-231	ENST00000502394	SHISA9	B4DS77	424 aa		10.4	□□□□□ -0.74
MATR3-231	ENST00000502394	AIP	O00170	330 aa		10.4	□□□□□ -0.74
MATR3-231	ENST00000502394	GMDS	O60547	372 aa		10.4	□□□□□ -0.74
MATR3-231	ENST00000502394	TMEM127	O75204	238 aa		10.4	□□□□□ -0.74
MATR3-231	ENST00000502394	SELE	P16581	610 aa		10.4	□□□□□ -0.74
MATR3-231	ENST00000502394	RAB3A	P20336	220 aa		10.4	□□□□□ -0.74
MATR3-231	ENST00000502394	BDKRB2	P30411	391 aa		10.4	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms