RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 THTPAQ9BU02 230 aa6.79□□□□□ -1.32
RIF1-211ENST00000494333 C19orf24Q9BVV8 132 aa6.79□□□□□ -1.32
RIF1-211ENST00000494333 CHID1Q9BWS9 393 aa6.79□□□□□ -1.32
RIF1-211ENST00000494333 TSSK6Q9BXA6 273 aa6.79□□□□□ -1.32
RIF1-211ENST00000494333 HCAR1Q9BXC0 346 aa6.79□□□□□ -1.32
RIF1-211ENST00000494333 C1QTNF5Q9BXJ0 243 aa6.79□□□□□ -1.32
RIF1-211ENST00000494333 MS4A7Q9GZW8 240 aaPredicted RBP6.79□□□□□ -1.32
RIF1-211ENST00000494333 TOR3AQ9H497 397 aa6.79□□□□□ -1.32
RIF1-211ENST00000494333 PNRC2Q9NPJ4 139 aaKnown RBP6.79□□□□□ -1.32
RIF1-211ENST00000494333 G6PC2Q9NQR9 355 aa6.79□□□□□ -1.32
RIF1-211ENST00000494333 TBC1D23Q9NUY8 699 aa6.79□□□□□ -1.32
RIF1-211ENST00000494333 VNN3Q9NY84 501 aa6.79□□□□□ -1.32
RIF1-211ENST00000494333 PRPF19Q9UMS4 504 aaKnown RBP6.79□□□□□ -1.32
RIF1-211ENST00000494333 ATRQ13535 2644 aa6.79□□□□□ -1.32
RIF1-211ENST00000494333 LOC105371242A0A075B767 164 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 A0A0G2JMP0 313 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 IGHV3-64DA0A0J9YX35 117 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 A0A0X1KG70 313 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 GNGT2O14610 69 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 SOX14O95416 240 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 CST1P01037 141 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 IGHV2-70P01814 119 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 HLA-DPB1P04440 258 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 GYPBP06028 91 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 ACSM4P0C7M7 580 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 SELEP16581 610 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 FMO3P31513 532 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 TPTEP56180 551 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 LCN2P80188 198 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 TRAP1Q12931 704 aaKnown RBP6.78□□□□□ -1.32
RIF1-211ENST00000494333 GK2Q14410 553 aaPredicted RBP6.78□□□□□ -1.32
RIF1-211ENST00000494333 KRTAP27-1Q3LI81 207 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 DCAF12L2Q5VW00 463 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 PGAP1Q75T13 922 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 LRRC28Q86X40 367 aaPredicted RBP6.78□□□□□ -1.32
RIF1-211ENST00000494333 ZNF283Q8N7M2 679 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 SLC37A3Q8NCC5 494 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 OR2T33Q8NG76 320 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 OR4M2Q8NGB6 313 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 OR9Q1Q8NGQ5 310 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 OR4Q3Q8NH05 313 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 ZNF420Q8TAQ5 688 aaPredicted RBP6.78□□□□□ -1.32
RIF1-211ENST00000494333 CANT1Q8WVQ1 401 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 POP5Q969H6 163 aaKnown RBP6.78□□□□□ -1.32
RIF1-211ENST00000494333 NIPSNAP1Q9BPW8 284 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 SLC30A2Q9BRI3 323 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 RBM4Q9BWF3 364 aaKnown RBP6.78□□□□□ -1.32
RIF1-211ENST00000494333 C1orf21Q9H246 121 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 PATZ1Q9HBE1 687 aaKnown RBP6.78□□□□□ -1.32
RIF1-211ENST00000494333 TMEM100Q9NV29 134 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 ARMC1Q9NVT9 282 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 KCNG2Q9UJ96 466 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 BAIAP2Q9UQB8 552 aa6.78□□□□□ -1.32
RIF1-211ENST00000494333 ANK3Q12955 4377 aaKnown RBP6.78□□□□□ -1.32
RIF1-211ENST00000494333 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.77□□□□□ -1.338e-10■■■■■ 42
RIF1-211ENST00000494333 COL6A5A8TX70 2615 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 IQCF6A8MYZ5 107 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 F5H5P2 479 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 H3BN98 237 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 TMEM178BH3BS89 294 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 J3QLI3 93 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 M0R135 149 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 ZNF593O00488 134 aaPredicted RBP6.77□□□□□ -1.33
RIF1-211ENST00000494333 ACOT8O14734 319 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 FOXH1O75593 365 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 CYB5R3P00387 301 aaPredicted RBP6.77□□□□□ -1.33
RIF1-211ENST00000494333 SPARCP09486 303 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 CLUP10909 449 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 ADRA2CP18825 462 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 SRP9P49458 86 aaKnown RBP6.77□□□□□ -1.33
RIF1-211ENST00000494333 BTG1P62324 171 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 SCGB2A2Q13296 93 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 CRMP1Q14194 572 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 ZMYND11Q15326 602 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 TMEM155Q4W5P6 130 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 SFRP4Q6FHJ7 346 aaPredicted RBP6.77□□□□□ -1.33
RIF1-211ENST00000494333 DCXRQ7Z4W1 244 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 SPICQ8N5J4 248 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 TEX29Q8N6K0 151 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 OR10G2Q8NGC3 310 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 OR10S1Q8NGN2 331 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 OR6K6Q8NGW6 343 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 NANPQ8TBE9 248 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 GIPC3Q8TF64 312 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 SPRYD4Q8WW59 207 aaPredicted RBP6.77□□□□□ -1.33
RIF1-211ENST00000494333 SPTSSAQ969W0 71 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 ZNF799Q96GE5 643 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 SIGLEC11Q96RL6 698 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 FEVQ99581 238 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 DGCR6LQ9BY27 220 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 KRTAP4-11Q9BYQ6 195 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 MMP26Q9NRE1 261 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 CENPMQ9NSP4 180 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 N6AMT1Q9Y5N5 214 aa6.77□□□□□ -1.33
RIF1-211ENST00000494333 AQP12BA6NM10 295 aa6.76□□□□□ -1.33
RIF1-211ENST00000494333 LRRC30A6NM36 301 aa6.76□□□□□ -1.33
RIF1-211ENST00000494333 RIIAD1A6NNX1 92 aa6.76□□□□□ -1.33
RIF1-211ENST00000494333 TRAPPC2LH3BP13 241 aa6.76□□□□□ -1.33
RIF1-211ENST00000494333 IFNL4K9M1U5 179 aa6.76□□□□□ -1.33
RIF1-211ENST00000494333 MPPED1O15442 326 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms