RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ADAT1Q9BUB4 502 aaKnown RBP12.4□□□□□ -0.42
BRCA1-223ENST00000494123 ZNF696Q9H7X3 374 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 DECR2Q9NUI1 292 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 BEX4Q9NWD9 120 aaPredicted RBP12.4□□□□□ -0.42
BRCA1-223ENST00000494123 RHBDD3Q9Y3P4 386 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 A0A087WXM4 84 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.4□□□□□ -0.42
BRCA1-223ENST00000494123 TRIM64A6NGJ6 449 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 DHRS7CA6NNS2 312 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 IGHV1-46P01743 117 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 HLA-DPB1P04440 258 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 ZNF20P17024 532 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 ATP5J2P56134 94 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 TNFAIP6P98066 277 aaPredicted RBP12.4□□□□□ -0.42
BRCA1-223ENST00000494123 DOC2BQ14184 412 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 DEFB113Q30KQ7 82 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 ZBTB37Q5TC79 503 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 OR10AC1Q8NH08 325 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 OR8S1Q8NH09 359 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 NEU4Q8WWR8 484 aaPredicted RBP12.4□□□□□ -0.42
BRCA1-223ENST00000494123 PIGCQ92535 297 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 FCGR1BQ92637 280 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 UFD1Q92890 307 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 PERPQ96FX8 193 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 SORCS2Q96PQ0 1159 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 MGLLQ99685 303 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 ISYNA1Q9NPH2 558 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 DHDHQ9UQ10 334 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 ZNF281Q9Y2X9 895 aa12.4□□□□□ -0.42
BRCA1-223ENST00000494123 ANXA2P2A6NMY6 339 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 ZNF850A8MQ14 1090 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 H0YL77 283 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 MLNRO43193 412 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 PLPP2O43688 288 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 GMDSO60547 372 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 CST4P01036 141 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 MAGEB1P43366 347 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 PTH2RP49190 550 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 CCL8P80075 99 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 MLLT11Q13015 90 aaPredicted RBP12.39□□□□□ -0.43
BRCA1-223ENST00000494123 PRDX4Q13162 271 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 FAM209AQ5JX71 171 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 Q6ZSR3 168 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 OR51A4Q8NGJ6 313 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 GPR148Q8TDV2 347 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 DVL3Q92997 716 aaPredicted RBP12.39□□□□□ -0.43
BRCA1-223ENST00000494123 MBD6Q96DN6 1003 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 HIST1H2AAQ96QV6 131 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 EGLN1Q9GZT9 426 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 VCX3AQ9NNX9 186 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 ZNF701Q9NV72 531 aaPredicted RBP12.39□□□□□ -0.43
BRCA1-223ENST00000494123 NKIRAS2Q9NYR9 191 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 MPC1Q9Y5U8 109 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 NAV2Q8IVL1 2488 aa12.39□□□□□ -0.43
BRCA1-223ENST00000494123 A6NIN4 97 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 CD1AP06126 327 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 ADH4P08319 380 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 OCM2P0CE71 109 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 PCMT1P22061 227 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 PSMB9P28065 219 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 EFNA4P52798 201 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 YIF1BQ5BJH7 314 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 CLVS2Q5SYC1 327 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 UBE2UQ5VVX9 321 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 LIPKQ5VXJ0 399 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 ZDHHC23Q8IYP9 409 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 SPERTQ8NA61 448 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 C10orf35Q96D05 121 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 PGLYRP3Q96LB9 341 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 GSX2Q9BZM3 304 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 SAP30LQ9HAJ7 183 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 BARX1Q9HBU1 254 aaPredicted RBP12.38□□□□□ -0.43
BRCA1-223ENST00000494123 ABCB9Q9NP78 766 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 USF3Q68DE3 2245 aa12.38□□□□□ -0.43
BRCA1-223ENST00000494123 F5H5P2 479 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 LMX1BO60663 402 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 NDUFS7O75251 213 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 SERPINA3P01011 423 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 NRASP01111 189 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 CD2P06729 351 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 PAX1P15863 534 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 SOX2P48431 317 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 SRP9P49458 86 aaKnown RBP12.37□□□□□ -0.43
BRCA1-223ENST00000494123 MZT1Q08AG7 82 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 GPR50Q13585 617 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 NEDD8Q15843 81 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 ARMCX4Q5H9R4 360 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 PLCXD3Q63HM9 321 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 KCTD8Q6ZWB6 473 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 RGP1Q92546 391 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-223ENST00000494123 FGGYQ96C11 551 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 OPALINQ96PE5 141 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 OR2V2Q96R30 315 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 MICU1Q9BPX6 476 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 TMED9Q9BVK6 235 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 ZNF275Q9NSD4 429 aaPredicted RBP12.37□□□□□ -0.43
BRCA1-223ENST00000494123 C14orf119Q9NWQ9 140 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 IL19Q9UHD0 177 aa12.37□□□□□ -0.43
BRCA1-223ENST00000494123 SETXQ7Z333 2677 aaKnown RBP12.37□□□□□ -0.43
BRCA1-223ENST00000494123 A0A1B0GWJ7 208 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms