RNA–Protein interactions for RNA: ENST00000483216.1

USP40-213, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 4

Gene USP40, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-213ENST00000483216 GPR174Q9BXC1 333 aa4.33□□□□□ -1.72
USP40-213ENST00000483216 SAV1Q9H4B6 383 aaPredicted RBP4.33□□□□□ -1.72
USP40-213ENST00000483216 FGF20Q9NP95 211 aaPredicted RBP4.33□□□□□ -1.72
USP40-213ENST00000483216 NLE1Q9NVX2 485 aaPredicted RBP4.33□□□□□ -1.72
USP40-213ENST00000483216 TAS2R3Q9NYW6 316 aa4.33□□□□□ -1.72
USP40-213ENST00000483216 COMMD9Q9P000 198 aa4.33□□□□□ -1.72
USP40-213ENST00000483216 COMMD3Q9UBI1 195 aa4.33□□□□□ -1.72
USP40-213ENST00000483216 OARD1Q9Y530 152 aa4.33□□□□□ -1.72
USP40-213ENST00000483216 POLR3HQ9Y535 204 aaPredicted RBP4.33□□□□□ -1.72
USP40-213ENST00000483216 SNX10Q9Y5X0 201 aa4.33□□□□□ -1.72
USP40-213ENST00000483216 MGAMO43451 1857 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 A0A1W2PQ67 120 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 DISC1C4P0D8 188 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 H3BN98 237 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 GPR171O14626 319 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 SGCEO43556 437 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 GPX5O75715 221 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 STK16O75716 305 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 OR2F2O95006 317 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 F10P00742 488 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 IGHV3-9P01782 118 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 APOC3P02656 99 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 CSF2P04141 144 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 LGALS2P05162 132 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 C8GP07360 202 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 PSMB1P20618 241 aaKnown RBP4.32□□□□□ -1.72
USP40-213ENST00000483216 PAICSP22234 425 aaKnown RBP4.32□□□□□ -1.72
USP40-213ENST00000483216 HOXA9P31269 272 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 ATP6V1E1P36543 226 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 SPAM1P38567 509 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 RFC3P40938 356 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 PMELP40967 661 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 BDKRB1P46663 353 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 XKP51811 444 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 LYZP61626 148 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 ACTC1P68032 377 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 ACTA1P68133 377 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 DEFA6Q01524 100 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 ADIGQ0VDE8 80 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 OR2F1Q13607 317 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 ZNF345Q14585 488 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 CHRNA6Q15825 494 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 MAPK14Q16539 360 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 HENMT1Q5T8I9 393 aaKnown RBP4.32□□□□□ -1.72
USP40-213ENST00000483216 CPTPQ5TA50 214 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 BCL2L15Q5TBC7 163 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 HIST2H2AA3Q6FI13 130 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 SLC25A25Q6KCM7 469 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 CYHR1Q6ZMK1 362 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 ZNF621Q6ZSS3 439 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 SERPINA12Q8IW75 414 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 TBC1D19Q8N5T2 526 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 C15orf54Q8N8G6 183 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 SYT14Q8NB59 555 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 GPR26Q8NDV2 337 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 OR1J4Q8NGS1 313 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 PPTC7Q8NI37 304 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 VN1R17PQ8TDU5 208 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 APH1BQ8WW43 257 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 UBE2E3Q969T4 207 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 TPD52L3Q96J77 140 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 PIWIL1Q96J94 861 aaKnown RBP4.32□□□□□ -1.72
USP40-213ENST00000483216 OR5M11Q96RB7 305 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 TSNAXQ99598 290 aaKnown RBP4.32□□□□□ -1.72
USP40-213ENST00000483216 FAM173AQ9BQD7 235 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 ZYG11BQ9C0D3 744 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 FBXO44Q9H4M3 255 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 ANKRD19PQ9H560 264 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 TPT1P8Q9HAU6 139 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 ADGRL4Q9HBW9 690 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 MCCC2Q9HCC0 563 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 SMCO4Q9NRQ5 59 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 NUDT15Q9NV35 164 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 BABAM2Q9NXR7 383 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 AHSPQ9NZD4 102 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 CTSFQ9UBX1 484 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 NDRG2Q9UN36 371 aaKnown RBP4.32□□□□□ -1.72
USP40-213ENST00000483216 SLC9A8Q9Y2E8 581 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 DHRS7Q9Y394 339 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 HES2Q9Y543 173 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 ENPP4Q9Y6X5 453 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 RALGAPA2Q2PPJ7 1873 aa4.32□□□□□ -1.72
USP40-213ENST00000483216 CITO14578 2027 aa4.31□□□□□ -1.72
USP40-213ENST00000483216 MGAT4DA6NG13 374 aa4.31□□□□□ -1.72
USP40-213ENST00000483216 ZNF729A6NN14 1252 aaPredicted RBP4.31□□□□□ -1.72
USP40-213ENST00000483216 ARPC1BO15143 372 aaKnown RBP4.31□□□□□ -1.72
USP40-213ENST00000483216 AKR7A2O43488 359 aa4.31□□□□□ -1.72
USP40-213ENST00000483216 GATBO75879 557 aaKnown RBP4.31□□□□□ -1.72
USP40-213ENST00000483216 ATG12O94817 140 aa4.31□□□□□ -1.72
USP40-213ENST00000483216 LY6G6DO95868 133 aa4.31□□□□□ -1.72
USP40-213ENST00000483216 SOD1P00441 154 aa4.31□□□□□ -1.72
USP40-213ENST00000483216 IFNA17P01571 189 aa4.31□□□□□ -1.72
USP40-213ENST00000483216 GKN3PP0CG01 181 aa4.31□□□□□ -1.72
USP40-213ENST00000483216 BCKDHAP12694 445 aa4.31□□□□□ -1.72
USP40-213ENST00000483216 KCNE1P15382 129 aa4.31□□□□□ -1.72
USP40-213ENST00000483216 RPA2P15927 270 aa4.31□□□□□ -1.72
USP40-213ENST00000483216 HSD17B2P37059 387 aa4.31□□□□□ -1.72
USP40-213ENST00000483216 CDKN2CP42773 168 aa4.31□□□□□ -1.72
USP40-213ENST00000483216 GZMMP51124 257 aa4.31□□□□□ -1.72
USP40-213ENST00000483216 HCCSP53701 268 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms