RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 RGCCQ9H4X1 137 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 CXorf56Q9H5V9 222 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 OPA3Q9H6K4 179 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 MSL2Q9HCI7 577 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 GPR160Q9UJ42 338 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 ENPP5Q9UJA9 477 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 HHLA2Q9UM44 414 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 PMF1-BGLAPU3KQ54 211 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 ARFGEF3Q5TH69 2177 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 USF3Q68DE3 2245 aa17.02■□□□□ 0.31
TRAPPC12-220ENST00000482645 SETXQ7Z333 2677 aaKnown RBP17.02■□□□□ 0.31
TRAPPC12-220ENST00000482645 GABRPO00591 440 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 GPX5O75715 221 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 SERPINA3P01011 423 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 HLA-DPB1P04440 258 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 OCM2P0CE71 109 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 SELEP16581 610 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 KITLGP21583 273 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 CFL1P23528 166 aaKnown RBP17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 MAGEB1P43366 347 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 LSM3P62310 102 aaKnown RBP17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 FAM3AP98173 230 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 MOGQ16653 247 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 OR56B2PQ8NGI1 322 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 OR13C3Q8NGS6 347 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 PIGTQ969N2 578 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 SPSB4Q96A44 273 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 hCG_38984A0A1B0GV85 526 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 LILRA1O75019 489 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 GABARAPO95166 117 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 IGLV3-1P01715 115 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 CRYBB2P43320 205 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 GSK3AP49840 483 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 DOK3Q7L591 496 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 CDH24Q86UP0 819 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 ANKRD13BQ86YJ7 626 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 RBM38Q9H0Z9 239 aaKnown RBP17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 SSR3Q9UNL2 185 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 DHDHQ9UQ10 334 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 CEPT1Q9Y6K0 416 aa17.01■□□□□ 0.31
TRAPPC12-220ENST00000482645 TRBV5-5A0A0J9YX44 114 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 A0A1B0GTI1 187 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 SMIM31A0A1B0GVY4 71 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 CD300LBA8K4G0 201 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 IQCF6A8MYZ5 107 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 SPRY3O43610 288 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 LMX1BO60663 402 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 CCL1P22362 96 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 ZNF81P51508 661 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 MMP15P51511 669 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 Q499Y3 187 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 ACSM3Q53FZ2 586 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 C22orf42Q6IC83 251 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 CD200R1LQ6Q8B3 271 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 TMEM91Q6ZNR0 172 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 CEACAM19Q7Z692 300 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 ISOC1Q96CN7 298 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 PLEKHA1Q9HB21 404 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 BATF3Q9NR55 127 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 ZNF391Q9UJN7 358 aa17■□□□□ 0.31
TRAPPC12-220ENST00000482645 A0A1W2PPK0 400 aa16.99■□□□□ 0.31
TRAPPC12-220ENST00000482645 ZNF879B4DU55 563 aa16.99■□□□□ 0.31
TRAPPC12-220ENST00000482645 FAM27D1Q5T7N8 215 aa16.99■□□□□ 0.31
TRAPPC12-220ENST00000482645 CENPOQ9BU64 300 aa16.99■□□□□ 0.31
TRAPPC12-220ENST00000482645 RNF167Q9H6Y7 350 aa16.99■□□□□ 0.31
TRAPPC12-220ENST00000482645 TXNL4BQ9NX01 149 aaKnown RBP16.99■□□□□ 0.31
TRAPPC12-220ENST00000482645 NAV2Q8IVL1 2488 aa16.99■□□□□ 0.31
TRAPPC12-220ENST00000482645 NOTCH2Q04721 2471 aa16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 TRDV1A0A1B0GX56 115 aa16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 ZSCAN5BA6NJL1 495 aa16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 SC5DO75845 299 aa16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 DHRS3O75911 302 aa16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 MAPK3P27361 379 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 TGFBR1P36897 503 aa16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 PPOXP50336 477 aa16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 ZMAT1Q5H9K5 638 aa16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 FOXB2Q5VYV0 432 aa16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 OR8G5Q8NG78 346 aa16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 RAB2BQ8WUD1 216 aa16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 IGFBPL1Q8WX77 278 aa16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 TMEM106AQ96A25 262 aa16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 PERPQ96FX8 193 aa16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 DERL3Q96Q80 235 aa16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 MS4A5Q9H3V2 200 aa16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 CYSLTR2Q9NS75 346 aa16.98■□□□□ 0.31
TRAPPC12-220ENST00000482645 A6NIN4 97 aa16.97■□□□□ 0.31
TRAPPC12-220ENST00000482645 C17orf100A8MU93 164 aa16.97■□□□□ 0.31
TRAPPC12-220ENST00000482645 OVOL3O00110 214 aa16.97■□□□□ 0.31
TRAPPC12-220ENST00000482645 TPD52L2O43399 206 aaKnown RBP16.97■□□□□ 0.31
TRAPPC12-220ENST00000482645 MTRF1O75570 445 aaKnown RBP16.97■□□□□ 0.31
TRAPPC12-220ENST00000482645 ZNF20P17024 532 aa16.97■□□□□ 0.31
TRAPPC12-220ENST00000482645 CA6P23280 308 aa16.97■□□□□ 0.31
TRAPPC12-220ENST00000482645 ACKR3P25106 362 aa16.97■□□□□ 0.31
TRAPPC12-220ENST00000482645 NCS1P62166 190 aa16.97■□□□□ 0.31
TRAPPC12-220ENST00000482645 TNK1Q13470 666 aa16.97■□□□□ 0.31
TRAPPC12-220ENST00000482645 OR8B8Q15620 311 aa16.97■□□□□ 0.31
TRAPPC12-220ENST00000482645 CTF1Q16619 201 aa16.97■□□□□ 0.31
TRAPPC12-220ENST00000482645 Q6ZR03 302 aa16.97■□□□□ 0.31
TRAPPC12-220ENST00000482645 OR2Z1Q8NG97 314 aa16.97■□□□□ 0.31
TRAPPC12-220ENST00000482645 OR10AD1Q8NGE0 317 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms