RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 ZNF275Q9NSD4 429 aaPredicted RBP9.55□□□□□ -0.88
CLDN11-205ENST00000480067 ENPP5Q9UJA9 477 aa9.55□□□□□ -0.88
CLDN11-205ENST00000480067 ZDHHC8Q9ULC8 765 aa9.55□□□□□ -0.88
CLDN11-205ENST00000480067 DHDHQ9UQ10 334 aa9.55□□□□□ -0.88
CLDN11-205ENST00000480067 NOP16Q9Y3C1 178 aaKnown RBP9.55□□□□□ -0.88
CLDN11-205ENST00000480067 RHBDD3Q9Y3P4 386 aa9.55□□□□□ -0.88
CLDN11-205ENST00000480067 V9GYS6 101 aa9.55□□□□□ -0.88
CLDN11-205ENST00000480067 MAP1AP78559 2803 aaPredicted RBP9.55□□□□□ -0.88
CLDN11-205ENST00000480067 ZNF816-ZNF321PA0A0X1KG74 233 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 C17orf100A8MU93 164 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 SERPINA3P01011 423 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 CST4P01036 141 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 RAF1P04049 648 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 FAHP16930 419 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 ZNF20P17024 532 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 CD53P19397 219 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 PPOXP50336 477 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 TSTQ16762 297 aaKnown RBP9.54□□□□□ -0.88
CLDN11-205ENST00000480067 ZBTB37Q5TC79 503 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 PAMR1Q6UXH9 720 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 Q6ZSR3 168 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 PHC2Q8IXK0 858 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 OR2Z1Q8NG97 314 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 PIGCQ92535 297 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 TMEM203Q969S6 136 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 C10orf35Q96D05 121 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 HIST1H2AAQ96QV6 131 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 DIRC2Q96SL1 478 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 TMED9Q9BVK6 235 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 RAB1BQ9H0U4 201 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 PLEKHA6Q9Y2H5 1048 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 NAV2Q8IVL1 2488 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 ZSCAN5BA6NJL1 495 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 ANXA2P2A6NMY6 339 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 ZNF850A8MQ14 1090 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 TPD52L2O43399 206 aaKnown RBP9.54□□□□□ -0.88
CLDN11-205ENST00000480067 GMDSO60547 372 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 HLA-DPB1P04440 258 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 CD2P06729 351 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 TNFSF4P23510 183 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 DNASE1P24855 282 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 SOX2P48431 317 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 OR8G1Q15617 311 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 PCGF3Q3KNV8 242 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 CLVS2Q5SYC1 327 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 SYT6Q5T7P8 510 aaPredicted RBP9.54□□□□□ -0.88
CLDN11-205ENST00000480067 Q6ZR03 302 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 SERPINA12Q8IW75 414 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 OR5D14Q8NGL3 314 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 OR8S1Q8NH09 359 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 RGP1Q92546 391 aaPredicted RBP9.54□□□□□ -0.88
CLDN11-205ENST00000480067 GTF3AQ92664 365 aaKnown RBP9.54□□□□□ -0.88
CLDN11-205ENST00000480067 ELMOD3Q96FG2 381 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 MRPS26Q9BYN8 205 aaKnown RBP9.54□□□□□ -0.88
CLDN11-205ENST00000480067 TPK1Q9H3S4 243 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 DECR2Q9NUI1 292 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 MPC1Q9Y5U8 109 aa9.54□□□□□ -0.88
CLDN11-205ENST00000480067 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.53□□□□□ -0.88
CLDN11-205ENST00000480067 TRIM64CA6NLI5 447 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 H7C417 338 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 OVOL3O00110 214 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 CCRL2O00421 344 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 LMX1BO60663 402 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 NRASP01111 189 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 IGHV1-46P01743 117 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 PSMA1P25786 263 aaKnown RBP9.53□□□□□ -0.88
CLDN11-205ENST00000480067 GABRA5P31644 462 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 CDKN1AP38936 164 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 MAGEB1P43366 347 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 RPS11P62280 158 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLDN11-205ENST00000480067 CCL8P80075 99 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 PRDX4Q13162 271 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 TRAM1Q15629 374 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 Q499Y3 187 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 ZDHHC23Q8IYP9 409 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 SPERTQ8NA61 448 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 OR10AD1Q8NGE0 317 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 OR13C5Q8NGS8 318 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 IGFBPL1Q8WX77 278 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 PP6455Q8WZ26 134 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 MUL1Q969V5 352 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 TMEM106AQ96A25 262 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 ADAT3Q96EY9 351 aaPredicted RBP9.53□□□□□ -0.88
CLDN11-205ENST00000480067 TRMT61AQ96FX7 289 aaKnown RBP9.53□□□□□ -0.88
CLDN11-205ENST00000480067 LURAP1Q96LR2 239 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 ADAT1Q9BUB4 502 aaKnown RBP9.53□□□□□ -0.88
CLDN11-205ENST00000480067 ABCB9Q9NP78 766 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 NKIRAS2Q9NYR9 191 aa9.53□□□□□ -0.88
CLDN11-205ENST00000480067 NOTCH2Q04721 2471 aa9.52□□□□□ -0.88
CLDN11-205ENST00000480067 CSMD1Q96PZ7 3565 aa9.52□□□□□ -0.88
CLDN11-205ENST00000480067 SETXQ7Z333 2677 aaKnown RBP9.52□□□□□ -0.89
CLDN11-205ENST00000480067 TRBV5-5A0A0J9YX44 114 aa9.52□□□□□ -0.89
CLDN11-205ENST00000480067 ANKRD61A6NGH8 418 aa9.52□□□□□ -0.89
CLDN11-205ENST00000480067 ZNF879B4DU55 563 aa9.52□□□□□ -0.89
CLDN11-205ENST00000480067 H0YL77 283 aa9.52□□□□□ -0.89
CLDN11-205ENST00000480067 GATBO75879 557 aaKnown RBP9.52□□□□□ -0.89
CLDN11-205ENST00000480067 OCMP0CE72 109 aaPredicted RBP9.52□□□□□ -0.89
CLDN11-205ENST00000480067 SMIM18P0DKX4 95 aa9.52□□□□□ -0.89
CLDN11-205ENST00000480067 JUNBP17275 347 aaPredicted RBP9.52□□□□□ -0.89
CLDN11-205ENST00000480067 MAPK3P27361 379 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms