RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 HSF1Q00613 529 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 PAN3Q58A45 887 aaKnown RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 NCMAPQ5T1S8 102 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 KIAA0895LQ68EN5 471 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 DNM1P34Q6PK57 102 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 TMPRSS11FQ6ZWK6 438 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 SULF2Q8IWU5 870 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 SLC25A45Q8N413 288 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 OR10Z1Q8NGY1 313 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 OR1L3Q8NH93 324 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 OR14A16Q8NHC5 309 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 GLYATL2Q8WU03 294 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 MITD1Q8WV92 249 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF524Q96C55 264 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 RBMXL1Q96E39 390 aaKnown RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 ADAT3Q96EY9 351 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 CNTNAP3BQ96NU0 1288 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 UCN2Q96RP3 112 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF2Q9BSG1 426 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 PTTG3PQ9NZH4 202 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 OPN4Q9UHM6 478 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 RFNGQ9Y644 331 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 FLNCQ14315 2725 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF816-ZNF321PA0A0X1KG74 233 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 H7C1Q1 480 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 H7C417 338 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 GLSO94925 669 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 RAB40ALP0C0E4 278 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 UBBP0CG47 229 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 UBCP0CG48 685 aaKnown RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 NQO2P16083 231 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 PTBP1P26599 531 aaKnown RBP eCLIP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 KIR3DL2P43630 455 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 HTR5AP47898 357 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 MRPS21P82921 87 aaKnown RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 SRSF3P84103 164 aaKnown RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 PPA1Q15181 289 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 RPL7L1Q6DKI1 246 aaKnown RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 GPR139Q6DWJ6 353 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 Q6ZRG5 221 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 MOB3CQ70IA8 216 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF565Q8N9K5 539 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 SCARB1Q8WTV0 552 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 RAB40AQ8WXH6 277 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 TMEM234Q8WY98 164 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 KIAA1143Q96AT1 154 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 C4orf45Q96LM5 186 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 FAAP24Q9BTP7 215 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 ULBP2Q9BZM5 246 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 VN1R1Q9GZP7 353 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 CHRNA9Q9UGM1 479 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 EXOGQ9Y2C4 368 aaKnown RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 MTORP42345 2549 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 TLX3O43711 291 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 GPRIN2O60269 458 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 AK1P00568 194 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 THBS1P07996 1170 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 NMBP08949 121 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF44P15621 663 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 CX3CR1P49238 355 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 HNRNPKP61978 463 aaKnown RBP eCLIP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 PLGLB1Q02325 96 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 ATPAF1Q5TC12 328 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 VHLLQ6RSH7 139 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 PXKQ7Z7A4 578 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 ADGRE4PQ86SQ3 457 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 MCEMP1Q8IX19 187 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 FNDC9Q8TBE3 224 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 BORCS8Q96FH0 119 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 VSTM2LQ96N03 204 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 MED18Q9BUE0 208 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 EDEM2Q9BV94 578 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 C1orf198Q9H425 327 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 FN3KRPQ9HA64 309 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 BIN3Q9NQY0 253 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 RNF150Q9ULK6 438 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 SLC7A11Q9UPY5 501 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 TRAV36DV7A0A075B6V5 113 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 A0A0G2JK05 382 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 SLC22A23A1A5C7 686 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 ARRDC5A6NEK1 342 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 K7EPK0 472 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 TPPPO94811 219 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 NDUFB6O95139 128 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 SELEP16581 610 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 TNFRSF4P43489 277 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 CSNK1A1P48729 337 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 ALKBH6Q3KRA9 238 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 CDONQ4KMG0 1287 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 ATP1A1-AS1Q5TC04 95 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 HES3Q5TGS1 186 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 PLCXD3Q63HM9 321 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 FAM71E2Q8N5Q1 922 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 OTOSQ8NHW6 89 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 HOXB13Q92826 284 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 ARL11Q969Q4 196 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 POM121Q96HA1 1249 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 SPSB2Q99619 263 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 URM1Q9BTM9 101 aaKnown RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 LMF2Q9BU23 707 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms