RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 MSMPQ1L6U9 139 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 Q499Y3 187 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 CCDC92Q53HC0 331 aaPredicted RBP13.4□□□□□ -0.26
CPSF3-203ENST00000475482 WDR38Q5JTN6 314 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 TPRA1Q86W33 373 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 ZNF584Q8IVC4 421 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 OR1F12Q8NHA8 337 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 NDNFQ8TB73 568 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 DYNC2LI1Q8TCX1 351 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 FAM168AQ92567 244 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 OR2H1Q9GZK4 316 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 CCDC59Q9P031 241 aaKnown RBP13.4□□□□□ -0.26
CPSF3-203ENST00000475482 NUFIP1Q9UHK0 495 aaKnown RBP13.4□□□□□ -0.26
CPSF3-203ENST00000475482 FBXL3Q9UKT7 428 aa13.4□□□□□ -0.26
CPSF3-203ENST00000475482 ATRQ13535 2644 aa13.39□□□□□ -0.27
CPSF3-203ENST00000475482 SERPINA5P05154 406 aa13.39□□□□□ -0.27
CPSF3-203ENST00000475482 CD2P06729 351 aa13.39□□□□□ -0.27
CPSF3-203ENST00000475482 CD79AP11912 226 aa13.39□□□□□ -0.27
CPSF3-203ENST00000475482 ZNF12P17014 697 aa13.39□□□□□ -0.27
CPSF3-203ENST00000475482 CX3CR1P49238 355 aa13.39□□□□□ -0.27
CPSF3-203ENST00000475482 MTNR1BP49286 362 aa13.39□□□□□ -0.27
CPSF3-203ENST00000475482 EVX1P49640 407 aa13.39□□□□□ -0.27
CPSF3-203ENST00000475482 ZMAT1Q5H9K5 638 aa13.39□□□□□ -0.27
CPSF3-203ENST00000475482 VHLLQ6RSH7 139 aa13.39□□□□□ -0.27
CPSF3-203ENST00000475482 DRAM2Q6UX65 266 aa13.39□□□□□ -0.27
CPSF3-203ENST00000475482 TMEM91Q6ZNR0 172 aa13.39□□□□□ -0.27
CPSF3-203ENST00000475482 PRSS35Q8N3Z0 413 aa13.39□□□□□ -0.27
CPSF3-203ENST00000475482 CCDC54Q8NEL0 328 aa13.39□□□□□ -0.27
CPSF3-203ENST00000475482 RNF166Q96A37 237 aaPredicted RBP13.39□□□□□ -0.27
CPSF3-203ENST00000475482 SLITRK2Q9H156 845 aa13.39□□□□□ -0.27
CPSF3-203ENST00000475482 MYOZ1Q9NP98 299 aaPredicted RBP13.39□□□□□ -0.27
CPSF3-203ENST00000475482 FAM206AQ9NX38 181 aa13.39□□□□□ -0.27
CPSF3-203ENST00000475482 HHLA2Q9UM44 414 aa13.39□□□□□ -0.27
CPSF3-203ENST00000475482 IQCMA0A1B0GVH7 501 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 VSTM5A8MXK1 200 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 M0R135 149 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 NDUFS8O00217 210 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 SYNGR3O43761 229 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 PNPP00491 289 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 MMP7P09237 267 aaPredicted RBP13.38□□□□□ -0.27
CPSF3-203ENST00000475482 OCM2P0CE71 109 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 ACHEP22303 614 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 OTX1P32242 354 aaPredicted RBP13.38□□□□□ -0.27
CPSF3-203ENST00000475482 GLRXP35754 106 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 KIR3DL2P43630 455 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 HTR5AP47898 357 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 RORCP51449 518 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 PRKXP51817 358 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 PSG4Q00888 419 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 GALK2Q01415 458 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 MFGE8Q08431 387 aaPredicted RBP13.38□□□□□ -0.27
CPSF3-203ENST00000475482 SNTB2Q13425 540 aaKnown RBP13.38□□□□□ -0.27
CPSF3-203ENST00000475482 TMEM249Q2WGJ8 235 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 UNQ9370/PRO34162Q6UXP9 181 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 CROCCP3Q8IVE0 287 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 ELMOD2Q8IZ81 293 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 OR52H1Q8NGJ2 320 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 TSEN15Q8WW01 171 aaKnown RBP13.38□□□□□ -0.27
CPSF3-203ENST00000475482 ZNF799Q96GE5 643 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 DCLRE1CQ96SD1 692 aaKnown RBP13.38□□□□□ -0.27
CPSF3-203ENST00000475482 PBOV1Q9GZY1 135 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 G6PC2Q9NQR9 355 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 A3GALT2U3KPV4 340 aa13.38□□□□□ -0.27
CPSF3-203ENST00000475482 TRAV1-2A0A0B4J238 106 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 TRBV5-5A0A0J9YX44 114 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 F5H5K5 113 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 PDCD5O14737 125 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 CDRT1O95170 752 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 ANXA2P07355 339 aaKnown RBP13.37□□□□□ -0.27
CPSF3-203ENST00000475482 UCHL1P09936 223 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 PATE4P0C8F1 98 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 CFL1P23528 166 aaKnown RBP13.37□□□□□ -0.27
CPSF3-203ENST00000475482 CALRP27797 417 aaKnown RBP13.37□□□□□ -0.27
CPSF3-203ENST00000475482 SLC6A9P48067 706 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 PDLIM4P50479 330 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 ZNF121P58317 390 aaPredicted RBP13.37□□□□□ -0.27
CPSF3-203ENST00000475482 RPS11P62280 158 aaKnown RBP eCLIP13.37□□□□□ -0.27
CPSF3-203ENST00000475482 HSD17B12Q53GQ0 312 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 ZNF774Q6NX45 483 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 LINC00299Q6ZSB3 139 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 AP3S1Q92572 193 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 MRPL24Q96A35 216 aaKnown RBP13.37□□□□□ -0.27
CPSF3-203ENST00000475482 PGAM5Q96HS1 289 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 OR14A2Q96R54 314 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 WNT5BQ9H1J7 359 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 RNF167Q9H6Y7 350 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 BRD7Q9NPI1 651 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 ZNF391Q9UJN7 358 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 DHDHQ9UQ10 334 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 SLC22A13Q9Y226 551 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 CMAHPQ9Y471 501 aa13.37□□□□□ -0.27
CPSF3-203ENST00000475482 A0A1B0GVI7 797 aa13.36□□□□□ -0.27
CPSF3-203ENST00000475482 LOC390937A0A1W2PQ73 354 aa13.36□□□□□ -0.27
CPSF3-203ENST00000475482 CLPXO76031 633 aa13.36□□□□□ -0.27
CPSF3-203ENST00000475482 USF1P22415 310 aaPredicted RBP13.36□□□□□ -0.27
CPSF3-203ENST00000475482 SDC2P34741 201 aa13.36□□□□□ -0.27
CPSF3-203ENST00000475482 TGFBR1P36897 503 aa13.36□□□□□ -0.27
CPSF3-203ENST00000475482 PABPC1L2AQ5JQF8 200 aa13.36□□□□□ -0.27
CPSF3-203ENST00000475482 NEU4Q8WWR8 484 aaPredicted RBP13.36□□□□□ -0.27
CPSF3-203ENST00000475482 SLC25A46Q96AG3 418 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms